Gene Information

Name : SSP0060 (SSP0060)
Accession : YP_300150.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3944
EC number : -
Position : 71017 - 71685 bp
Length : 669 bp
Strand : +
Note : similar to gi|506697|gb|AAA64640.1| [Staphylococcus aureus], percent identity 62 in 221 aa, BLASTP E(): 2e-72

DNA sequence : 
ATGGAAGAAACAATTGATTTAAATAAACTATTTGCAATATTAAAGAAAAACATGAAGTATTTAATAATTTTACCGATAGT
GTTTCTTGTTTTAAGTATGATGATGACATTCTTATTTATCACACCTAAATATTCTTCTTCTACACAAGTACTTGTTAACC
AAAAAGAAACAGACAGCCAAATGATGGCTCAACAAGTGCAATCAGACTTACAACTAGTCAATACATACTCAGAAATTATT
AAGAGTCCAAGAATATTAGACAAAGTATCTAAAAATTTAAAAGGTAAGTATTCTAGTGAAGAAATTGCAGGCATGCTTAC
AGTTAGCAATCAAGCAGAATCACAAATTTTAAACATAGCTGTTGAAAATGAAAGTCGTGAAGCAGCAGGTAAAGTTGCTA
ATGAAATAGCAAACGTCTTTAGTAAAGATGTTAATAAAATTATGAATGTAGATAATGTTTCTATTCTTTCTAAAGCAGAT
TATTATGGAAGTAAAGATTCACCTAAACCACTTATTAACGCAGTAGTCGGTGTTTTTTTAGGCTTAATTGTCGCACTTAT
TATAATATTCTTGAAAGAAATCTTAGATAAGAGAATAAAAACAGAAGAAGATGTAGAAGAATTATTGGATTTACCAGTAT
TAGGAGTTATACAAAGATTTGATTATTAA

Protein sequence : 
MEETIDLNKLFAILKKNMKYLIILPIVFLVLSMMMTFLFITPKYSSSTQVLVNQKETDSQMMAQQVQSDLQLVNTYSEII
KSPRILDKVSKNLKGKYSSEEIAGMLTVSNQAESQILNIAVENESREAAGKVANEIANVFSKDVNKIMNVDNVSILSKAD
YYGSKDSPKPLINAVVGVFLGLIVALIIIFLKEILDKRIKTEEDVEELLDLPVLGVIQRFDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-90 100
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-53 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein VFG1297 Protein 2e-33 54