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Name : SSP0046 (SSP0046) Accession : YP_300136.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : cassette chromosome recombinase C Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 56975 - 58657 bp Length : 1683 bp Strand : + Note : similar to gi|49257045|dbj|BAD24834.1| [Staphylococcus aureus], percent identity 95 in 537 aa, BLASTP E(): 0.0 DNA sequence : ATGAGTGGTAAAATTGCACTTTATTCACGCGTTAGTACGTCTGAGCAGTCAGAACATGGTTATTCTGTAAAGGAGCAGGA ACAAGTACTCATCAAAGAAGTTGTGAAAAATTTCCCGGGTTATGACTATGAAACTTATATCGATTCTGGTATATCAGGTA AAAATATTGAAGGTCGACCAGCAATGAAACGTCTATTACAAGATGTTAAGGATAATAAAATCGAAATGGTATTAAGTTGG AAATTAAATCGTATTTCTCGCTCAATGAGAGACGTGTTTAATATTATCCATGAATTCAAAGAGCATGGCGTAGGTTATAA ATCGATTTCTGAGAATATTGATACATCCAATGCTTCTGGAGAAGTACTCGTTACAATGTTTGGGTTAATAGGATCAATAG AACGTTCAACACTGATCAGTAATGTCAAGATGTCGATGAATGCTAAAGCGCGCAGTGGAGAGGCTATCACAGGCAGGTTG CAGGGATATAGGTTATCACTTAACCCACTTACCCAGAAAAATGATTTGGTTATCGATGAAAATGAAGCTAACATTGTTCG AGAAATATTCGATTTGTACTTAAATCATAATAAAGGACTTAAGGCAATTACAACCGTACTTAATCAAAAGGGGTATCGTA CTATTAATCAAAAGCCATTTTCAGTGTATGGTGTTAAATACATTTTGAATAATCCAGTCTATAAAGGTTATGTCAGATTC AATAACCATCAAAACTGGGCTGTACAGCGAAGAAGTGGCAAAAGTGATAAAAATGATGTGATATTGGTCAAAGGAAAACA TGAAGCCATTATAAGTGAAGAAGTATTTGATCAAGTTCATGAGAAATTAGCATCTAAAAGTTTTAAACCAGGCAGACCTA TTGGTGGAGATTTTTACCTTCGTAGCCTTATTAAATGTCCAGAATGCGGTAATAATATGGTATGTCGACGGACTTATTAT AAAACCAAAAAGTCAAAAGAACGGACAATCAAGCGTTATTACATTTGTTCCTTATTCAATCGTTCAGGGAGTTCTGCATG TCACAGTAATGCCATCAATGCTGAAGTCGTCGAGCGTGTAATTAATGTTCATTTGAATCGTATTCTGTCTCAACCAGATA TTATCAAGCAGATTGCGTCAAATGTGATAGAAGAACTGAAACAAAAGCATAGTAACCAAACAGAAATTAAATATGACATT GATAGTTTAGAAAAACAAAAAGCTAAGCTTAAAACACAACAAGAACGATTGTTAGAATTGTTCTTAGATGATCAAATGGA TAGCGAAATGTTAAAAGCAAAACAAAGTCAGATGAATGGACAACTAAAGATGCTAGATAAGCAAATTAAAGAAGCGCAAC AAGCTACTGAATCACAAGATGAAGTACCAAATTTTGATAAACTGAAAAGCCGTTTAACCATGATGATTAGCCGATTTAGT GTCTACTTAAGGGAAGCTACACCAGAAGCAAAAAATCAACTTATGAAGATGTTGATTGATTCTATTGAAATTACTACAGA TAAAAAAGTGAAACTCGTACGGTATAAAATTGACGAAAGTCTTATCCCTCAATCTTTGAAAAAAGATTGGGGGTCTTTTT TTATGCCCAAAATTCACTTTATTATTTATGGTACACAGAAATATTCTATCGACAAAATTACCACTTTTGCCACTTTGTCA TAA Protein sequence : MSGKIALYSRVSTSEQSEHGYSVKEQEQVLIKEVVKNFPGYDYETYIDSGISGKNIEGRPAMKRLLQDVKDNKIEMVLSW KLNRISRSMRDVFNIIHEFKEHGVGYKSISENIDTSNASGEVLVTMFGLIGSIERSTLISNVKMSMNAKARSGEAITGRL QGYRLSLNPLTQKNDLVIDENEANIVREIFDLYLNHNKGLKAITTVLNQKGYRTINQKPFSVYGVKYILNNPVYKGYVRF NNHQNWAVQRRSGKSDKNDVILVKGKHEAIISEEVFDQVHEKLASKSFKPGRPIGGDFYLRSLIKCPECGNNMVCRRTYY KTKKSKERTIKRYYICSLFNRSGSSACHSNAINAEVVERVINVHLNRILSQPDIIKQIASNVIEELKQKHSNQTEIKYDI DSLEKQKAKLKTQQERLLELFLDDQMDSEMLKAKQSQMNGQLKMLDKQIKEAQQATESQDEVPNFDKLKSRLTMMISRFS VYLREATPEAKNQLMKMLIDSIEITTDKKVKLVRYKIDESLIPQSLKKDWGSFFMPKIHFIIYGTQKYSIDKITTFATLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0046 | YP_300136.1 | cassette chromosome recombinase C | Not tested | SCC15305cap | Protein | 0.0 | 100 |
| ccrC | BAD24834.1 | cassette chromosome recombinase C | Not tested | Type-V SCCmec | Protein | 0.0 | 96 |
| unnamed | ACL99832.1 | cassette chromosome recombinase C8 | Not tested | Type-V SCCmec | Protein | 0.0 | 94 |
| ccrC8 | BAG06191.1 | cassette chromosome recombinase C8 | Not tested | Type-VII SCCmec | Protein | 0.0 | 94 |
| SAPIG0035 | YP_005732845.1 | cassette chromosome recombinase C7 | Not tested | Type-V SCCmec | Protein | 0.0 | 94 |
| unnamed | BAB47672.1 | site-specific recombinase | Not tested | Type-III SCCmec | Protein | 0.0 | 94 |
| unnamed | BAC53834.1 | site-specific recombinase | Not tested | SRImec-III and SCCmec-III region | Protein | 0.0 | 94 |
| ccrC | YP_251971.1 | casette chromosome site specific recombinase CcrC | Not tested | SCCmec | Protein | 0.0 | 92 |
| unnamed | ACL99844.1 | cassette chromosome recombinase C2 | Not tested | Type-V SCCmec | Protein | 0.0 | 91 |
| ccrC2 | BAG06212.1 | cassette chromosome recombinase C2 | Not tested | Type-VII SCCmec | Protein | 0.0 | 91 |
| SAPIG0050 | YP_005732860.1 | cassette chromosome recombinase C | Not tested | Type-V SCCmec | Protein | 0.0 | 91 |
