|
Name : SSP0042 (SSP0042) Accession : YP_300132.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 51947 - 53422 bp Length : 1476 bp Strand : + Note : similar to gi|14021054|dbj|BAB47678.1| [Staphylococcus aureus], percent identity 90 in 491 aa, BLASTP E(): 0.0 DNA sequence : ATGTTATCGGATAATATTATAAAAGAATTATATTCAAAAGAAGATATTCGCATAGAATTAGAGCTCACTCCACATATGTT TAATAAAAGAATGGAAACCATTGCTAAGCTTTTTAAAATTGATATGAAAAACTTTCACAATTACAAAGGCCAAGATAAAA ATAATCAATATACATTTAATGGCGTCGCAAAAGAATTAATAAAGGTGCTACTCAAAAGTGTAGACTATTACCCAGTGGAT ATAAATTCCAAAGATTTTAAACAGAATGGGCAACCTAAAAAAGAGATGATTGAAAATATAAGTGCTTCTAGTTACATGGA ATATACTTATCAGTTAATGAAAGCTATCAATGAAATTCAATATAAAAGATTAATTGCAGACATACATATGAAAGATGTAT ATCAAAATACCAAAGCATGGTTAGGCATTGGTGAATCAATTAATAAAAAGGAACAAGAATTATACCAATATATGAAACCT TTACCCTTACATAAAAGAATTGAGCTACAAAATGAAGTATTAAAATCTATAGATGAAACGATTTTTCAATTTATGGCAAA AGAACATAGAAACACCCAAATCAAAGAAAATAATGAATTAGAAGAGTACACAAATGCAATAAAAGAAGGTAAGTATCCCA AAAAGGATTACGAATTAAACCACCTATTATACAAGAAAAATGAAATACCATTAGATAGCTTAATTAAAGATGTATGGGAC TATGATGAAACAGAGTATATAGAGCTTGATTGGTTAATTGCAGATATGCTAAAACGTTCACAAAGAGCTGATAGTAATTT TATCGAAAGTTTAGAGAAGAAAAATAAATTGAGAAAAAATATTCATAAAGATTCCATTAAAAGTATATCTAGGTTGATTG ATCATGAATTGGTTAAAAATAATAGAAAGTGGGACGTAGCAGAATTTTATAAAAATCAACAATTTTGGAATAGTAGTTCA TTAAGGCGTAACTCTCAAAAATTTGGAATTTTATATTACAAAAAAAATAGGTTACATACAATGAATCAAAGTAATATTAT TAAAAAAATAAAAATTATCGAGGCTAATTTAGAGAGTGCAAATAAACAGCCGAGCTATTTAGATTTCTTTTTACAAGCTA AGTTTGATTTAGAGAGGTTAGAAAGTGAATTAATGAAATATAGCATTAATCCGAAATACTATAATAAAATAAATAGTGAT TACGTAAGATATGCTATTGAAGATGTACATAATGCAATTATTAAAATTGACAGATATATAAGTAACGATAAAGTGAAGGT AAACTATTCAAATGCCCAAATGGTAGTGAGAAACGAAATAACAGAACAAGGAAGCTACTTTGTAACCCAGGCATTGAATA TGGTGTCAAAGGTAGAAGAGTCTGGCTACTACTTTGATAATTTCATGGTAGGACCTTTCGTAGAAGACTTTAAAAAAGCA ATTAAAAATCGAAGATTTGGTTCTAAAACAGATTAA Protein sequence : MLSDNIIKELYSKEDIRIELELTPHMFNKRMETIAKLFKIDMKNFHNYKGQDKNNQYTFNGVAKELIKVLLKSVDYYPVD INSKDFKQNGQPKKEMIENISASSYMEYTYQLMKAINEIQYKRLIADIHMKDVYQNTKAWLGIGESINKKEQELYQYMKP LPLHKRIELQNEVLKSIDETIFQFMAKEHRNTQIKENNELEEYTNAIKEGKYPKKDYELNHLLYKKNEIPLDSLIKDVWD YDETEYIELDWLIADMLKRSQRADSNFIESLEKKNKLRKNIHKDSIKSISRLIDHELVKNNRKWDVAEFYKNQQFWNSSS LRRNSQKFGILYYKKNRLHTMNQSNIIKKIKIIEANLESANKQPSYLDFFLQAKFDLERLESELMKYSINPKYYNKINSD YVRYAIEDVHNAIIKIDRYISNDKVKVNYSNAQMVVRNEITEQGSYFVTQALNMVSKVEESGYYFDNFMVGPFVEDFKKA IKNRRFGSKTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0042 | YP_300132.1 | hypothetical protein | Not tested | SCC15305cap | Protein | 0.0 | 100 |
| SAPIG0030 | YP_005732840.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 0.0 | 91 |
| unnamed | ACL99828.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 0.0 | 91 |
| unnamed | BAB47678.1 | hypothetical protein | Not tested | Type-III SCCmec | Protein | 0.0 | 91 |
| unnamed | BAC53841.1 | hypothetical protein | Not tested | SRImec-III and SCCmec-III region | Protein | 0.0 | 91 |
| unnamed | BAG06187.1 | hypothetical protein | Not tested | Type-VII SCCmec | Protein | 0.0 | 91 |
