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Name : SSP0346 (SSP0346) Accession : YP_300436.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 378537 - 379694 bp Length : 1158 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGAGTAAATTTACAGAAGCTGAAAAAGTTCAAATTCTAGAAGATTTAGTTGCGATTAAATCAGTTAATGACAATGAAAT GGAAGTTTGTATGTATTTAAAAGACTTACTATCGCAACACAATATTGATGCTAAGATTGTTAAAATCAATGACACGCGTG CCAATCTAGTTGCTGAAATTGGTGAATCAGGACCAGTCTTAGGTATTTCAGGACATATGGATGTTGTCTCAGAAGGCGAT ATTAAAAAATGGACATATGATCCATTCAAATTAACTGAAGTTGACGGCAAATTACACGGTCGTGGTGCTGCAGATATGAA ATCAGGTTTAGCCGCTTTAGTATTGAGCCTTATTGATATTCATGATCAAGGTTTATTAGAATATGGTAGAATCCGTTTAC TCGCCACTGCAGGTGAAGAGATTGTTGGCGAAGGGGCTAAAGCTTTCCAAGAACAAGGTTACATGACAGATGTAGAAGCA CTTGTCATTGCTGAATCTTCACAAGACCGCATCATCTATGCACATAAGGGTTCGATGGATATCCGTGTTATTTCCAGAGG TAAAGCATCACATAGTTCAATGCCACAACTTGGTTTCAATGCCATTTCACCACTCGTAAAATTTGTTTACAAAGCGGATG AAGGCTTTAAAAGTTTCAATAAACGTAACGATTTATTAGGTGATGTACTAATGAACGCGACTATTTTCAATGGTGGTAAT CAAGTGAATTCAATTCCAGAGCATGCCGAATCTGAATTCAATATACGTACGATTCCAGAACATGATAATGACCAATTCAT CACTTATTTTAATGAAATTTTGAAGCAGGTTGAAACCGATAAAACAGATATAGAAATTGACACTTATATGTCTAGACCTC CTGTATATACGACAGGTGAAAATAAATTAGCTTCATTAGCGCATGATTTGGGTGAAAAATATTTAAATTCCGATTTACCT CTTGAAGCATCACCTGGTGTAACCGATGCATCCGATTTATTAGTCGATAAAGATGAAGACTTTTCATTCATTATGTATGG ACCTGGATTAATACATCAAGCACACCAAGTTGATGAATATGTTGAAAAAGATGTTTATCTTACATTTATAGATTTATATA CAGAATTTTTCCCTACTTATTTAAAAAGCATGAAATAA Protein sequence : MSKFTEAEKVQILEDLVAIKSVNDNEMEVCMYLKDLLSQHNIDAKIVKINDTRANLVAEIGESGPVLGISGHMDVVSEGD IKKWTYDPFKLTEVDGKLHGRGAADMKSGLAALVLSLIDIHDQGLLEYGRIRLLATAGEEIVGEGAKAFQEQGYMTDVEA LVIAESSQDRIIYAHKGSMDIRVISRGKASHSSMPQLGFNAISPLVKFVYKADEGFKSFNKRNDLLGDVLMNATIFNGGN QVNSIPEHAESEFNIRTIPEHDNDQFITYFNEILKQVETDKTDIEIDTYMSRPPVYTTGENKLASLAHDLGEKYLNSDLP LEASPGVTDASDLLVDKDEDFSFIMYGPGLIHQAHQVDEYVEKDVYLTFIDLYTEFFPTYLKSMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-67 | 44 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-68 | 44 |
