|
Name : SSP0335 (SSP0335) Accession : YP_300425.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 368198 - 369196 bp Length : 999 bp Strand : - Note : similar to gi|2673748|emb|CAA05973.1| [Lactobacillus casei], percent identity 49 in 332 aa, BLASTP E(): 2e-77 DNA sequence : ATGGACTCATATAAACACCTTACCATAGAAGAACGCGAAAGAATATTCTTTCTTAAGGCTAAAGGATATTCTTTAAGAAA AATCGCTAAAGATATTTGCAGAAGCCCATCAACTGTTTCTCGTGAATTAGCTAGAAACGCTTCCTCCGGAAGCTACAACC CTACATATGCTCATAATAATTACAAGTGCAATAAGAAAAAATGCGGACGTAAATTATTATTAAAATCAAAGATTTTATTT GATAAAGTAAAATTTTTATTTCTTAATCAACAGTGGTCACCTGAACAAATTGCAAACCGATTGAAAAGTGAAGGGTTTCA CCTGGCTATTAGTTATAATACTATTTACCGTGCTATTTATTTAGGCCTATTTGATCCGCCTAAATTAAGTCACGGTAACC GTGGATGTATTAGATTGTTAAGGCATAGAGGTAAGACTAGACACACTAAAAGTCATCAAGAAAATAGAGGTAGAATTAGA ATAAGTTATTCAATACATGATCGACCTCAAATCATTAATGATAGAGAACGAATCGGAGATTGGGAAGCCGATACTGTTAT GGGAAAAACTGGAAAATCTTGTCTTGTTACATTAGTAGATCGTAAAACCGGCTATTTACTTTGTGGTAAAGTACCTAAAA AGAAATCTGAGTTTGTGAAACAGAAAATCGTAGATTTACTTGGCACCTTACCAAACAATAAACGATTATCTATTACACCA GATAGAGGTAAAGAGTTTTCTAAACATCCAGAAATTACGTCAGAGTTAGATAACATTCCATTTTATTTTCCTGATCCTCA TTCCCCTTGGCAACGTGGAACTAATGAAAATACAAATGGATTGATTAGAGAATATATAGCCAAAGGTATTGATATTGATA ACATTACAGAAGAACAAATAGAACACTATGTTTATAAGTTGAATACACGTCCTCGTAAACGATTTGATTGGAAAACACCA GCAGAGCTTTTCAATGATAAGGTGTTGCACTTAATTTGA Protein sequence : MDSYKHLTIEERERIFFLKAKGYSLRKIAKDICRSPSTVSRELARNASSGSYNPTYAHNNYKCNKKKCGRKLLLKSKILF DKVKFLFLNQQWSPEQIANRLKSEGFHLAISYNTIYRAIYLGLFDPPKLSHGNRGCIRLLRHRGKTRHTKSHQENRGRIR ISYSIHDRPQIINDRERIGDWEADTVMGKTGKSCLVTLVDRKTGYLLCGKVPKKKSEFVKQKIVDLLGTLPNNKRLSITP DRGKEFSKHPEITSELDNIPFYFPDPHSPWQRGTNENTNGLIREYIAKGIDIDNITEEQIEHYVYKLNTRPRKRFDWKTP AELFNDKVLHLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_02710 | YP_005176177.1 | ISApl1 transposase | Not tested | ICEPmu1 | Protein | 3e-65 | 51 |
| unnamed | BAC67550.1 | putative transposase | Not tested | Type-IVc SCCmec | Protein | 2e-49 | 41 |
| SAR0085 | YP_039551.1 | transposase | Not tested | Type-II SCCmec | Protein | 2e-49 | 41 |
