Gene Information

Name : SSP2383 (SSP2383)
Accession : YP_302473.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2451193 - 2452485 bp
Length : 1293 bp
Strand : -
Note : similar to gi|231566|sp|Q01255|ARSB_STAXY [Staphylococcus xylosus], percent identity 88 in 429 aa, BLASTP E(): 0.0

DNA sequence :
ATGATGACTATTTTGGCAATTGTCATTTTTTTATTAACGTTAACGATTGTTATCTGGCAACCTAAAGGATTAGATATCGG
TATTACAGCATTAGTCGGTGCTATCCTTGCGCTGATTACAGGGGTTGTTCGTTTTTCAGATGTGTTAGAAGTAACAGGTA
TTGTATGGAATGCCACATTAACATTTGTGGCGGTTATCCTTATTTCATTAATATTAGATGAAATTGGATTTTTTGAATGG
TCAGCGATACATATGGTGAGGGCTTCTAAAGGTAATGGGTTGAAAATGTTTGTGTTTATTATGTTACTTGGTGCAGTGGT
TGCAGCATTTTTTGCTAATGATGGCGCAGCATTAATCTTAACGCCAATTGTACTCGCTATGGTGCGAAATCTAGATTTTA
ATAAAAAAGTGATATTTCCATTTATTATTGCAAGTGGATTCATCGCAGATACAACGTCATTGCCATTTATTGTAAGTAAT
TTAGTTAATATTGTTTCGGCAGATTATTTTGATATTGGTTTTGTTGAATACTTAAGTCGAATGATGATTCCTAATCTATT
CGCGCTCGTCGCGAGTATTGTAGTGCTTTGGATATATTTCAGAAAATCAATACCTAAAACGTTTCATACAGAAAATCTCC
AAACACCTAAAAATGCGATTAAAGATGAAAAATTATTTAAAATATCGTGGATTGTATTAGCAATTTTACTCGTAGGTTAT
CTTATAAGTGAATTTGTTCAAATACCTGTATCGATTGTCGCAGGTATGGTTGCTTTAATCTTTGTATTGTTGGCTCGCAA
ATCACATGCTGTACATACGAAGCAAGTTATTAAAGGCGCACCATGGAATATCGTGTTATTTTCTATTGGTATGTATTTAG
TAGTATTTGGATTGAAGAATGTGGGTATTACAACCATTTTAGCTGATACTTTATCTAATATTTCAAACTATGGCCTGTTT
AGTAGCGTTCTAGGCATGGGCTTTATAGCCGCATTTCTATCATCAGTCATGAATAATTTACCGACCGTACTTATTGATGC
TATTGCGATTGGCCAGTCCAATGTAACAGGGATAATTAAAGAAGGTATGATCTACGCCAATGTGATTGGGTCAGATTTAG
GTCCTAAAATCACACCAATCGGTTCGTTGGCAACATTGCTTTGGTTGCATGTATTGACTCAAAAAGGGGTCAAAATTTCA
TGGGGAACGTATTTTAAAACAGGTATTATAATTACGATTCCAGTATTATTTGTAACACTTGTCGGTTTATACCTTACGCT
CATATTATTTTAA

Protein sequence :
MMTILAIVIFLLTLTIVIWQPKGLDIGITALVGAILALITGVVRFSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEW
SAIHMVRASKGNGLKMFVFIMLLGAVVAAFFANDGAALILTPIVLAMVRNLDFNKKVIFPFIIASGFIADTTSLPFIVSN
LVNIVSADYFDIGFVEYLSRMMIPNLFALVASIVVLWIYFRKSIPKTFHTENLQTPKNAIKDEKLFKISWIVLAILLVGY
LISEFVQIPVSIVAGMVALIFVLLARKSHAVHTKQVIKGAPWNIVLFSIGMYLVVFGLKNVGITTILADTLSNISNYGLF
SSVLGMGFIAAFLSSVMNNLPTVLIDAIAIGQSNVTGIIKEGMIYANVIGSDLGPKITPIGSLATLLWLHVLTQKGVKIS
WGTYFKTGIIITIPVLFVTLVGLYLTLILF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-164 89
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-164 88
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-170 87
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 5e-112 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0575 Protein 1e-172 89
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0574 Protein 4e-167 89
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0578 Protein 4e-112 59
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0576 Protein 3e-111 59
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0577 Protein 2e-110 58
SSP2383 YP_302473.1 arsenical pump membrane protein BAC0031 Protein 6e-109 58