Gene Information

Name : SSP2237 (SSP2237)
Accession : YP_302327.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2298609 - 2299496 bp
Length : 888 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGTCTAAAGTTACTGGATCAGAGAGAGTTAAAAGAGGCATGGCAGAAATGCAAAAAGGCGGCGTCATTATGGACGTTGT
AAATGCAGAGCAAGCTAAAATTGCGGAAGAAGCAGGAGCGGTTGCTGTCATGGCGTTAGAACGTGTACCATCTGACATTA
GAGCAGCAGGTGGCGTAGCGCGTATGGCTAATCCAAAAATTGTAGAGGAAGTAATGAATGCTGTTTCAATACCAGTCATG
GCGAAAGGACGTATCGGTCATATTACGGAGGCACGTGTACTTGAGTCTATGGGTGTAGATTATATCGATGAGTCTGAAGT
ATTAACACCTGCTGATGAAGAATATCATTTAAGAAAAGATACATTTACAGTACCATTTGTCTGTGGATGTCGTAATTTAG
GTGAAGCAGCTCGTCGTATTGGTGAAGGTGCAGCGATGTTACGTACGAAAGGTGAACCTGGTACTGGTAATATTGTGGAA
GCAGTAAGACATATGAGACAAGTTAATTCTGAAGTAAGTCGTTTAACTGTTATGAATGACGATGAGATTATGACAGAAGC
TAAAAATATTGGTGCGCCATATGAAGTATTAAAAAATATTAAAGAAAATGGTAAATTACCAGTAGTTAATTTTGCAGCAG
GTGGTGTTGCGACACCTCAAGATGCCGCTTTAATGATGGAATTAGGCGCAGATGGTGTGTTTGTAGGATCAGGTATTTTT
AAATCTGAAGATCCAGAAAAATTTGCAAAAGCCATTGTTCAAGCAACAACACATTATCAAGATTATGAATTAATTGGTCG
TTTAGCAAAAGAGCTAGGTATAGCGATGAAAGGTTTAGATATCAATGACCTGTCTTTAGAAGAACGTATGCAAGAGCGTG
GTTGGTAA

Protein sequence :
MSKVTGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVM
AKGRIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKDTFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
AVRHMRQVNSEVSRLTVMNDDEIMTEAKNIGAPYEVLKNIKENGKLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGRLAKELGIAMKGLDINDLSLEERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-81 62
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-81 61
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-81 61