Gene Information

Name : SSP2231 (SSP2231)
Accession : YP_302321.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : stress response-related Clp ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2292092 - 2294554 bp
Length : 2463 bp
Strand : -
Note : similar to gi|27467205|ref|NP_763842.1| [Staphylococcus epidermidis ATCC 12228], percent identity 93 in 820 aa, BLASTP E(): 0.0

DNA sequence :
ATGCTATTTGGAAGACTTACAGAAAGAGCACAACGTGTATTAGCACATGCTCAAGAAGAAGCAATTCGTTTAAACCATTC
AAATATAGGAACAGAACATCTACTTTTAGGTTTAATGAAAGAACCTGAAGGTATTGCTGCCAAAGTTTTAGAAACTTTTG
AGATTACTGAAGAAAAAGTTGTTGAAGAAGTAGAAAAATTAATTGGCCATGGTCAAGAACAAATGGGTGCATTGCACTAC
ACACCTCGTGCGAAAAAAGTTATAGAATTATCAATGGATGAAGCAAGAAAATTACATCATAACTTTGTTGGAACAGAGCA
TATTTTGCTTGGTCTAATCAGAGAAAATGAAGGTGTTGCAGCACGCGTATTTGCAAACTTAGATTTAAATATAACAAAAG
CACGTGCACAAGTTGTTAAAGCGTTAGGTAGCCCTGAAATGAGCAACAAAAATGCACAAGCAAACAAATCAAATAACACA
CCAACATTGGATAGTCTTGCACGTGACTTAACTGTTATCGCTAAAGACGGTACGTTAGATCCAGTGATTGGTAGAGATAA
AGAAATAACAAGAGTCATTGAAGTGTTAAGTCGTCGTACTAAGAACAACCCTGTATTAATTGGTGAACCGGGTGTTGGTA
AAACAGCAATTGCGGAAGGTTTAGCACAAGCAATTGTTAATAATGAAGTACCTGAAACATTAAAAGGAAAACGTGTAATG
TCATTAGATATGGGAACAGTAGTGGCTGGAACGAAATATCGTGGTGAATTTGAAGAACGTTTGAAAAAAGTTATGGAAGA
AATACACCAAGCAGGTAATGTGATATTATTCATTGATGAATTACACACACTAGTTGGTGCTGGTGGCGCAGAAGGTGCGA
TTGATGCTTCAAATATTCTTAAACCAGCCTTAGCACGTGGCGAGCTACAATGTATCGGTGCGACAACATTGGATGAATAT
CGTAAAAATATTGAAAAAGATGCAGCACTTGAACGTCGTTTCCAACCTGTTCAAGTAGATGAACCTACAGTAGAAGACAC
TATTGAAATCTTAAAAGGTTTACGTGATCGCTATGAAGCACATCACCGTATCAATATTTCTGATGAAGCATTGGTATCAG
CTGCTAAATTGAGTCATCGCTATGTTTCAGACCGTTTCTTACCAGATAAAGCGATTGATTTAATTGATGAAGCTAGTTCA
AAAGTAAGACTGAAAAGTCATACAACACCACCAAACTTAAAAGAAATTGAACAACAAATTGAACAAGTCAAAAATGAAAA
AGATGCTGCAGTACATGCTCAAGAATTCGAAAATGCGGCAAATCTTCGTGATAAACAAACTAAATTAGAAAAACAATATG
AAGAAGCTAATACGAATTGGAAGAATACTCAAAACGGTGATAACACATCATTATCTGAAGAAGATATCGGTGAAGTCATC
GCTGGTTGGACAGGTATTCCATTGACTAAGATTAATGAAACAGAATCAGATCGTCTGCTTAACTTAGAAGATACACTACA
CAATAGAGTGATTGGACAAAAAGACGCAGTGACATCCATTAGTAAAGCAGTGAGACGTGCAAGAGCTGGATTGAAAGATC
CTAAACGTCCAATCGGTAGCTTTATTTTCTTAGGACCTACGGGTGTAGGTAAGACTGAGCTAGCGCGTGCGTTAGCGGAG
TCTATGTTCGGTGAAGACGATGCTATGATCCGCGTTGACATGAGTGAGTTCATGGAAAAACATGCTGTCAGCCGTTTAGT
TGGTGCTCCTCCAGGCTATGTAGGACATGACGATGGTGGACAATTAACTGAAAAAGTAAGACGTAAACCTTATTCTGTTA
TTTTATTTGATGAAATCGAAAAAGCACATCCAGATGTATTTAACATCTTGCTACAAGTGTTAGACGATGGTCATCTAACA
GATACCAAAGGTCGTCGTGTTGACTTCCGTAATACGGTAATTATTATGACATCAAATGTTGGCGCGCAAGAATTACAAGA
TCAACGTTTTGCTGGTTTTGGTGGCGCTACAGAAGGTCAAGATTATGAATCAATTCGCAAGACAATGATGAAAGAATTGA
AAAATGCTTTCCGTCCAGAGTTCTTAAACCGTGTTGATGATATCATTGTATTCCACAAACTTTCTAAAGATGAGTTGAAA
CAAATTGTGACAATGATGGTTAACAAACTTACTAATCGACTTTCTGAACAAGATATTAATATATCGGTTACAGAAGCGGC
TAAAGAGAAAATTGCCGAAGAAGGTTACGATCCAGAGTATGGTGCAAGACCACTTATTCGTGCTATTCAAAAAACAGTTG
AAGATAACTTGAGTGAATTGATTTTAGACGGTAACCAAATTGAAGGTAAAGAAGTTAAAATTGATCACGATGGTAAAGAA
TTCAAATATGATATTACGGAAAGACAAGATTCAGCTAAAGATAAAGAAACATCTGAATCATAA

Protein sequence :
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLETFEITEEKVVEEVEKLIGHGQEQMGALHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMSNKNAQANKSNNT
PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEANTNWKNTQNGDNTSLSEEDIGEVI
AGWTGIPLTKINETESDRLLNLEDTLHNRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRRVDFRNTVIIMTSNVGAQELQDQRFAGFGGATEGQDYESIRKTMMKELKNAFRPEFLNRVDDIIVFHKLSKDELK
QIVTMMVNKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVKIDHDGKE
FKYDITERQDSAKDKETSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP2231 YP_302321.1 stress response-related Clp ATPase VFG0079 Protein 0.0 72
SSP2231 YP_302321.1 stress response-related Clp ATPase VFG0080 Protein 7e-165 53