|
Name : SSP2219 (SSP2219) Accession : YP_302309.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : transcription antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 2281552 - 2282100 bp Length : 549 bp Strand : - Note : similar to gi|426473|emb|CAA53738.1| [Staphylococcus carnosus], percent identity 95 in 182 aa, BLASTP E(): 2e-96 DNA sequence : ATGTCTGAAGAAGTTGGCGCAAAGCGTTGGTATGCTGTGCATACTTATTCTGGTTATGAGAATAAAGTGAAAAAGAATTT AGAAAAACGTGTTGAATCTATGAATATGACTGAACAAATATTCAGAGTTGTTATACCAGAAGAAGAAGAAACACAAGTTA AAGATGGCAAAGCCAAAACATTAACTAAAAAAACATTCCCAGGATACGTGCTAGTCGAGTTAGTAATGACTGACGAATCA TGGTATATCGTAAGAAATACACCTGGTGTAACAGGATTTGTTGGTTCAGCTGGTGCTGGATCAAAGCCAAATCCATTACT TCCTGAAGAAGCACGCTTCATCCTTAAACAAATGGGCATGAAAGAAAAAACAATCGATGTTCAAATTGACTTAGGTGAAC AAGTAAGAATTAAATCAGGCCCATTTGCAAATCAAGTTGGTGAAGTTCAAGAAATTGAAGCGGATAAATTCAAACTTACT GTTCTTGTAGACATGTTTGGTAGAGAAACACCAGTAGAAGTAGAATTTGATCAAGTTGAAAAACTGTAA Protein sequence : MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKTLTKKTFPGYVLVELVMTDES WYIVRNTPGVTGFVGSAGAGSKPNPLLPEEARFILKQMGMKEKTIDVQIDLGEQVRIKSGPFANQVGEVQEIEADKFKLT VLVDMFGRETPVEVEFDQVEKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-38 | 52 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 3e-40 | 50 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-30 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-30 | 41 |
