|
Name : SSP1947 (SSP1947) Accession : YP_302037.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2005132 - 2006181 bp Length : 1050 bp Strand : + Note : similar to gi|49486813|ref|YP_044034.1| [Staphylococcus aureus subsp. aureus MSSA476], percent identity 43 in 343 aa, BLASTP E(): 7e-72 DNA sequence : GTGGCATACATTGAAAAGCGAGGTAAAACATGGAGATATTCAATCTCATATGTAGATGATGAAGGCAACCGTAAAAAGGT TCAAAAAGGTGGTTATCGTACTAAACAAGAAGCTAAACGAATTGCAGAAGATTTAGAGTATAAAATGAGAAATGGTTATG CTGTAAGTAATGATATAACATTTGCAGATTATTTTTATCAATGGTATGAAGTTAATAAACTACCACACGTATCAGAATCA ACTAAAAGACATTATGAATCTGCATACAAGCATATTAAAGACCATTTTAGACACAAGTTATTAAAAGATATTAAACGTAC TGAATACCAAAAGTTTCTCAATGAGTACGGTTTAACGCATAGTTATGAAACGATTAGAAAGTTAAATAGTTATATACGTA ATGCATTCGATGATGCTATACATGAAGGTTATGTTATTAAAAACCCTACATACAAAGCAGAATTACACGCATCTGTTCCA GCCAAAACAGAAGAAATGAAGTTTATTAATGAATCAGAATTCAAAAAACTTAAACATTATTTTGAACAAAAAAATACCAC CTCATCACTTGTGCTATTAGTAGCACTTACAACAGGTGGTAGATTTTCAGAAATTGCTAAATTGAAACGTGAAGATCTGG ATATTAAAAATAATAAAATTCATTTAAGAGGTACCAAAACCGAAACATCAGACAGAATAATAAGTATTGATACAGTAACT ATGAAACGTATTCAATCATTTATTGATTCACGACCTACTAATATCAGTGGTTACATCTTTACTGTTGATGGTAAAACAAT AACAAATGCTGCTGTAAACAAAGTACTGAGAAAAGCATGTGCTAATCTAAATATAAAAGAGATAACTATTCACTCGCTAA GACACAGTTTCTGTTCTATACTCATACATCATGGCTTTTCAATACTATATATATCAAAACATTTAGGACATTCCAACCCA GCCACGACACAATCCATTTACTCCCACCTACTTCAAGAAACTTACGAGCGTGAAGATGAAAAAGCAATGAAATTATTAGA AACTATTTAA Protein sequence : MAYIEKRGKTWRYSISYVDDEGNRKKVQKGGYRTKQEAKRIAEDLEYKMRNGYAVSNDITFADYFYQWYEVNKLPHVSES TKRHYESAYKHIKDHFRHKLLKDIKRTEYQKFLNEYGLTHSYETIRKLNSYIRNAFDDAIHEGYVIKNPTYKAELHASVP AKTEEMKFINESEFKKLKHYFEQKNTTSSLVLLVALTTGGRFSEIAKLKREDLDIKNNKIHLRGTKTETSDRIISIDTVT MKRIQSFIDSRPTNISGYIFTVDGKTITNAAVNKVLRKACANLNIKEITIHSLRHSFCSILIHHGFSILYISKHLGHSNP ATTQSIYSHLLQETYEREDEKAMKLLETI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | YP_253723.1 | integrase | Not tested | ¥ÕSh1 | Protein | 4e-50 | 44 |
| int | NP_372526.1 | integrase | Not tested | ¥ÕSa3 | Protein | 1e-50 | 44 |
| int | NP_646756.1 | integrase | Not tested | ¥ÕSa3 | Protein | 4e-51 | 44 |
| int | YP_494623.1 | integrase | Not tested | ¥ÕSa3 | Protein | 1e-51 | 44 |
| int | YP_494623.1 | integrase | Not tested | ¥ÕSa3 | Protein | 1e-51 | 44 |
| SAKOR_01984 | YP_008492172.1 | DNA integration/recombination/inversion protein | Not tested | ¥ÕSa3 | Protein | 1e-50 | 44 |
| int | NP_375111.1 | integrase | Not tested | ¥ÕSa3 | Protein | 6e-50 | 43 |
