Gene Information

Name : SSP0195 (SSP0195)
Accession : YP_300285.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : glycine betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 222866 - 224359 bp
Length : 1494 bp
Strand : +
Note : similar to gi|4574120|gb|AAD23900.1| [Staphylococcus xylosus], percent identity 92 in 497 aa, BLASTP E(): 0.0

DNA sequence :
ATGGAACTTGTAAATCAATTGTCTCGTCGTCAATACATTGATGGTGAGTGGGTAGATAGCTCGAATCAAACAACAAGAAA
AATTATTAATCCATTTAACCAAGAAGTCATATTTGAAGTAGCAGAAGGTACTGCTGAGGATAGTGAACGTGCGATATTAG
CTGCACGTCGTGCTTTTGAAAAAGGTGAATGGTCATTAGAAACAAGTGAAAATAGAGGCAAAAAAGTACGTGCTATTGCC
GATTTAATTGTGACACATCGTGAAGAATTAGCGAGACTTGAAACATTAGATACAGGTAAAACATTAGAAGAATCTTACGC
AGATATGGATGATATTGCGAACGTATTTAACTATTTTGCAGGTTTGGCAGATAAAGATGGTGGAGAATTGATAGATTCTC
CAATCCCAAATACAGAAAGCAAAGTAATAAAAGAACCAATTGGAGTTGTAACTCAAATTACACCATGGAATTATCCTTTA
CTACAAGCTTCATGGAAACTTGCACCTGCATTAGCAACAGGTTGTTCGCTTGTTATGAAACCAAGTGAAATCACGCCGTT
AACAACAATTCGTGTATTTGAATTAATGGAAGAAGTTGGCTTCCCTAAAGGTGTGATTAATTTAGTATTAGGAAAAGGAT
CTGAAGTTGGTGAACCGTTATCTGCACATAAAGAAGTGGATTTAGTGTCATTTACTGGTGGCATAAAAACTGGTAAACAC
ATTATGAAACAAGCAGCAGATCATGTTACAGATGTAGCGTTAGAACTTGGCGGTAAAAACCCAAATGTCATTTTTGACGA
TGCCGATTTTGACTTAGCAGTAGATCAAGCATTAAATGGCGGATTCTTCCATGCAGGTCAAGTATGCTCTGCTGGCGCAA
GAATTATCGTGCATAACGATATTAAAGAAAAATTCGAAGCAGCCCTTATTGAAAGAGTTAAAAATATTAAATTAGGTAAT
GGTTTTGACTCAGAAACGGAAATGGGACCTGTGATTTCAGCTGAACATAGAGAAAAAATTGAAAATTATATGGAAATTGC
AAAAGCTGAAAATGCAACGATTGCTATTGGTGGTAAACGTCCTGAACGTGAAGACCTACAAGATGGGTTCTTCTTTGAAC
CAACTGTAATTACAAACTGTGATACTTCTATGAGAATTGTTCAAGAGGAAGTATTTGGACCAGTTGTAACAATTGAAGGT
TTTTCAACTGAAGCAGAAGCCATAGAACTTGCGAACGATTCCATTTACGGTTTGGCTGGCGGTGTCTTTACACAAGATAT
AGGCAAAGCTGAACGCGTCGTTAATAAATTGAAGATGGGAACAGTTTGGATTAATGATTTCCATCCATACTTTGCCCAAG
CACCTTGGGGTGGCTATAAACAATCCGGTATTGGTAGAGAGCTTGGTAAAGAAGGTCTAGCTGAATATCAAGTAGAGAAA
CATATATTACGTAATACAAACCCAGAACCAGTTAATTGGTTTGGTAAAGCATAA

Protein sequence :
MELVNQLSRRQYIDGEWVDSSNQTTRKIINPFNQEVIFEVAEGTAEDSERAILAARRAFEKGEWSLETSENRGKKVRAIA
DLIVTHREELARLETLDTGKTLEESYADMDDIANVFNYFAGLADKDGGELIDSPIPNTESKVIKEPIGVVTQITPWNYPL
LQASWKLAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLVLGKGSEVGEPLSAHKEVDLVSFTGGIKTGKH
IMKQAADHVTDVALELGGKNPNVIFDDADFDLAVDQALNGGFFHAGQVCSAGARIIVHNDIKEKFEAALIERVKNIKLGN
GFDSETEMGPVISAEHREKIENYMEIAKAENATIAIGGKRPEREDLQDGFFFEPTVITNCDTSMRIVQEEVFGPVVTIEG
FSTEAEAIELANDSIYGLAGGVFTQDIGKAERVVNKLKMGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLAEYQVEK
HILRNTNPEPVNWFGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-79 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-82 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-82 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-82 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-81 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP0195 YP_300285.1 glycine betaine aldehyde dehydrogenase VFG0082 Protein 5e-80 43