Name : SSP0195 (SSP0195) Accession : YP_300285.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Virulence Product : glycine betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 222866 - 224359 bp Length : 1494 bp Strand : + Note : similar to gi|4574120|gb|AAD23900.1| [Staphylococcus xylosus], percent identity 92 in 497 aa, BLASTP E(): 0.0 DNA sequence : ATGGAACTTGTAAATCAATTGTCTCGTCGTCAATACATTGATGGTGAGTGGGTAGATAGCTCGAATCAAACAACAAGAAA AATTATTAATCCATTTAACCAAGAAGTCATATTTGAAGTAGCAGAAGGTACTGCTGAGGATAGTGAACGTGCGATATTAG CTGCACGTCGTGCTTTTGAAAAAGGTGAATGGTCATTAGAAACAAGTGAAAATAGAGGCAAAAAAGTACGTGCTATTGCC GATTTAATTGTGACACATCGTGAAGAATTAGCGAGACTTGAAACATTAGATACAGGTAAAACATTAGAAGAATCTTACGC AGATATGGATGATATTGCGAACGTATTTAACTATTTTGCAGGTTTGGCAGATAAAGATGGTGGAGAATTGATAGATTCTC CAATCCCAAATACAGAAAGCAAAGTAATAAAAGAACCAATTGGAGTTGTAACTCAAATTACACCATGGAATTATCCTTTA CTACAAGCTTCATGGAAACTTGCACCTGCATTAGCAACAGGTTGTTCGCTTGTTATGAAACCAAGTGAAATCACGCCGTT AACAACAATTCGTGTATTTGAATTAATGGAAGAAGTTGGCTTCCCTAAAGGTGTGATTAATTTAGTATTAGGAAAAGGAT CTGAAGTTGGTGAACCGTTATCTGCACATAAAGAAGTGGATTTAGTGTCATTTACTGGTGGCATAAAAACTGGTAAACAC ATTATGAAACAAGCAGCAGATCATGTTACAGATGTAGCGTTAGAACTTGGCGGTAAAAACCCAAATGTCATTTTTGACGA TGCCGATTTTGACTTAGCAGTAGATCAAGCATTAAATGGCGGATTCTTCCATGCAGGTCAAGTATGCTCTGCTGGCGCAA GAATTATCGTGCATAACGATATTAAAGAAAAATTCGAAGCAGCCCTTATTGAAAGAGTTAAAAATATTAAATTAGGTAAT GGTTTTGACTCAGAAACGGAAATGGGACCTGTGATTTCAGCTGAACATAGAGAAAAAATTGAAAATTATATGGAAATTGC AAAAGCTGAAAATGCAACGATTGCTATTGGTGGTAAACGTCCTGAACGTGAAGACCTACAAGATGGGTTCTTCTTTGAAC CAACTGTAATTACAAACTGTGATACTTCTATGAGAATTGTTCAAGAGGAAGTATTTGGACCAGTTGTAACAATTGAAGGT TTTTCAACTGAAGCAGAAGCCATAGAACTTGCGAACGATTCCATTTACGGTTTGGCTGGCGGTGTCTTTACACAAGATAT AGGCAAAGCTGAACGCGTCGTTAATAAATTGAAGATGGGAACAGTTTGGATTAATGATTTCCATCCATACTTTGCCCAAG CACCTTGGGGTGGCTATAAACAATCCGGTATTGGTAGAGAGCTTGGTAAAGAAGGTCTAGCTGAATATCAAGTAGAGAAA CATATATTACGTAATACAAACCCAGAACCAGTTAATTGGTTTGGTAAAGCATAA Protein sequence : MELVNQLSRRQYIDGEWVDSSNQTTRKIINPFNQEVIFEVAEGTAEDSERAILAARRAFEKGEWSLETSENRGKKVRAIA DLIVTHREELARLETLDTGKTLEESYADMDDIANVFNYFAGLADKDGGELIDSPIPNTESKVIKEPIGVVTQITPWNYPL LQASWKLAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLVLGKGSEVGEPLSAHKEVDLVSFTGGIKTGKH IMKQAADHVTDVALELGGKNPNVIFDDADFDLAVDQALNGGFFHAGQVCSAGARIIVHNDIKEKFEAALIERVKNIKLGN GFDSETEMGPVISAEHREKIENYMEIAKAENATIAIGGKRPEREDLQDGFFFEPTVITNCDTSMRIVQEEVFGPVVTIEG FSTEAEAIELANDSIYGLAGGVFTQDIGKAERVVNKLKMGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLAEYQVEK HILRNTNPEPVNWFGKA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-79 | 43 |
aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 42 |
aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 42 |
aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-82 | 42 |
aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-81 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SSP0195 | YP_300285.1 | glycine betaine aldehyde dehydrogenase | VFG0082 | Protein | 5e-80 | 43 |