|
Name : SSP0188 (SSP0188) Accession : YP_300278.1 Strain : Staphylococcus saprophyticus ATCC 15305 Genome accession: NC_007350 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 213864 - 215243 bp Length : 1380 bp Strand : + Note : similar to gi|16077459|ref|NP_388273.1| [Bacillus subtilis subsp. subtilis str. 168], percent identity 55 in 457 aa, BLASTP E(): e-149 DNA sequence : ATGACAAAGTTAGAAGTAATTAATCCAGCTACTAATGAAGTTTTAGAGCGTTTAGATTATGCTACGCATGAACAAATTAA TCATCAAATTAAACAAGCACATCAAGCATTTCAAAACTGGAAGAAGGTCGATGCGCACGAACGTTCAGCGAAATTAGCGC AATGGGCTCAATTAATTGATGATCATCAAGACGAACTTGCACGTCTGATTACATTAGAAGGAGGTAAGCCACTGGCAGAG GCAAAAGGTGAAGTAGCTTATGCGAACTCATACGTCAAATGGTATGCCGAAGAAGCAAAACGTGTATATGGTCGTACGAT ACCAGCTAATTCACCTTCGAAAAAAATTGTTATAGATAAATTTCCAGTAGGTGTCGTAGGCGCGATTACACCGTGGAACT TCCCAGCAGCAATGATTACGCGTAAGATGGCACCAGCATTGGCGGCAGGATGTACAATCATTTGTAAACCAGCAGTTAAA ACGCCACTGACAACGATTAAACTTGTGGAACTTGCACATCAAGCGGGTTTTCCAAAAGATGCTATCTCCTACATTATTGC TTCAGGTAAAGACGCAGGGGACATTTTCACAAATCATAGTTTGATTAGTAAAGTGACATTCACTGGATCGACTGCTGTTG GTAAATCATTAATTGAATCATCTGCGCAACAAGTTAAAAATGTGACGATGGAGCTAGGTGGCTTAGCACCGCTTATCGTT CATAATGATGCAGACATTGAAGCGGCAGTAGACGGTACGATTGCTTCGAAGTTTAGAAATGCAGGACAAACTTGTATATG TGCAAACAGAATCTATGTTCACGAAGATATCGCCGAGGCATATAACGAAAAATTAATAGAAAAAGTGCATGCATTATCTG TAGGTGATGGCTTGAAAGAAGAGGTTAAAATTGGACCACTCATTGACAATCAAGCTGTAGAAAAAGTGTTAACACACATC AAAGATGCGCAAGAAAAAGGTGGGCAACTATCACGTAGTATTGAAGATATTCAAGCATTGGGCGGTAATTTCTTAAAACC GGTAGTCATTACGAATGCAAATTTAGATATGAAAGCAATGCATGAAGAAACGTTTGGACCAGTTGCGCCAGTGATGACAT ATAGTGATTTAGATGAAGTGATTAACATAGCAAATGACACAGAATTTGGCTTAGCTTCATATTTCTTCACGAATGATTAT CGAACTGGATTAAAACTCTTTAATGAACTGGAATATGGTGTGATTGGTTGGAACGATGGTGGACCATCTGCTGCACATGC ACCATTTGGTGGTTTGAAAGAAAGTGGTTATGGTAGAGAAGGTGGCGTAGAAGGCATAGAACCTTATTTAGAAACGAAGT ATCTTTCTATACAAGAATAA Protein sequence : MTKLEVINPATNEVLERLDYATHEQINHQIKQAHQAFQNWKKVDAHERSAKLAQWAQLIDDHQDELARLITLEGGKPLAE AKGEVAYANSYVKWYAEEAKRVYGRTIPANSPSKKIVIDKFPVGVVGAITPWNFPAAMITRKMAPALAAGCTIICKPAVK TPLTTIKLVELAHQAGFPKDAISYIIASGKDAGDIFTNHSLISKVTFTGSTAVGKSLIESSAQQVKNVTMELGGLAPLIV HNDADIEAAVDGTIASKFRNAGQTCICANRIYVHEDIAEAYNEKLIEKVHALSVGDGLKEEVKIGPLIDNQAVEKVLTHI KDAQEKGGQLSRSIEDIQALGGNFLKPVVITNANLDMKAMHEETFGPVAPVMTYSDLDEVINIANDTEFGLASYFFTNDY RTGLKLFNELEYGVIGWNDGGPSAAHAPFGGLKESGYGREGGVEGIEPYLETKYLSIQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-100 | 48 |
