Gene Information

Name : SSP1323 (SSP1323)
Accession : YP_301413.1
Strain : Staphylococcus saprophyticus ATCC 15305
Genome accession: NC_007350
Putative virulence/resistance : Virulence
Product : response regulator ArlR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1365242 - 1365904 bp
Length : 663 bp
Strand : +
Note : similar to gi|27468018|ref|NP_764655.1| [Staphylococcus epidermidis ATCC 12228], percent identity 83 in 219 aa, BLASTP E(): e-101

DNA sequence :
ATGACAAAAATCTTAATAGTAGAAGACGAGCAAAACCTTGCGCGTTTTATAGAGCTTGAACTTGAACATGAAAATTATGA
CGTAGATATTGAATATGATGGGAAGCCTGGTTTAGAAAAAGCATTATCAAATACTTATGATTTAATTCTTTTAGACTTAA
TGCTTCCAAATATAAATGGTTTAGAAATTTGTCGTCAGATTCGTCAAAATCAAACTACACCTATCATTATCATCACTGCT
AAAAGTGATACTTACGATAAGGTGGCTGGTTTGGATTACGGTGCGGATGATTATATCGTTAAACCGTTTGATATAGAAGA
ATTATTAGCAAGAATCAGAGCTATGTTACGAAGACAACCACAAAAGAATCTAATCGATATCAAAGGCATCATTATAGATA
AAGATGCTTTTAAAGTCACTGTGGATGGACAACCACTTGATTTAACAAAAACAGAATATGATTTGTTATTTTTACTAGTT
GAAAACAGAAACCACGTTCTGCAAAGGGAACAAATCATTACGGACGTATGGGGATACGATACAGAAGTAGAAACAAATGT
AGTAGATGTTTACATTCGATATTTAAGAAACAAATTAAAACCCTTTGGTAAAGATAAGTGTATCGAAACAGTACGCGGTG
TAGGGTACGTGGTAAGACAATGA

Protein sequence :
MTKILIVEDEQNLARFIELELEHENYDVDIEYDGKPGLEKALSNTYDLILLDLMLPNINGLEICRQIRQNQTTPIIIITA
KSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAMLRRQPQKNLIDIKGIIIDKDAFKVTVDGQPLDLTKTEYDLLFLLV
ENRNHVLQREQIITDVWGYDTEVETNVVDVYIRYLRNKLKPFGKDKCIETVRGVGYVVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-36 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP1323 YP_301413.1 response regulator ArlR AE015929.1.gene1106. Protein 8e-78 84
SSP1323 YP_301413.1 response regulator ArlR NC_010079.5776364.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_002952.2859858.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_007622.3794948.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_003923.1003417.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_013450.8614146.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_002951.3238224.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_007793.3914065.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR NC_002758.1121390.p0 Protein 2e-81 82
SSP1323 YP_301413.1 response regulator ArlR HE999704.1.gene1528. Protein 2e-50 55
SSP1323 YP_301413.1 response regulator ArlR BAC0125 Protein 8e-35 43
SSP1323 YP_301413.1 response regulator ArlR BAC0308 Protein 2e-34 42
SSP1323 YP_301413.1 response regulator ArlR FJ349556.1.orf0.gene Protein 9e-29 42
SSP1323 YP_301413.1 response regulator ArlR AE016830.1.gene1681. Protein 5e-36 41
SSP1323 YP_301413.1 response regulator ArlR NC_005054.2598277.p0 Protein 3e-31 41
SSP1323 YP_301413.1 response regulator ArlR NC_014475.1.orf0.gen Protein 3e-31 41
SSP1323 YP_301413.1 response regulator ArlR BAC0197 Protein 7e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSP1323 YP_301413.1 response regulator ArlR VFG0596 Protein 3e-36 42