Gene Information

Name : Reut_B3961 (Reut_B3961)
Accession : YP_298161.1
Strain :
Genome accession: NC_007348
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 594724 - 595413 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTGATTGTCGAAGACGAGCCCAAGGCGGGCGATTACCTGCTCAAGGGGCTGACCGAATCCGGCTTTGTGGT
CGACCTTGCGCGCGACGGTGTCGACGGTCTGGCCCACGCGCGCGAGCAGCCTTATGACCTCATCGTGCTCGACGTGATGC
TGCCCGGCATGGACGGCTGGAGCGTGCTGCGTGAACTGCGCCGCGAACGCGATACGCCGGTGCTGTTCCTGACCGCGCGC
GATGAACTGCAGGACCGGTTGAAGGGACTGGAGCTTGGCGCCGACGACTACATGGTCAAGCCATTCGCGTTTGCCGAGCT
GGTCATGCGCATCCGCACCATCCTGCGCCGCGGGCCGCTGCGCGAGAGCGAGTTCATCGAAGTCGCCGATTTGCAGATCG
ACGCAATCCGCCGACGCGTGTCGCGCTCGGGCCAGAAGATCGACCTCACATCGAAGGAATTCGCGCTGCTCTACCTGCTC
GCGCGGCGCCGCGGCGAGGTGCTGTCGCGCTCGCTGATCGCCTCGCAGGTGTGGGACGTGAACTTCGACAGCAACACCAA
TGTGGTCGATGTCTCCATCCGGAGGCTACGCGCGAAGGTCGACGATCCGTTCGACCACAAGCTGATCCACACGCGGCGCG
GCATGGGCTACGTGCTCGATGATGGCGAGCCCGGACTGGGCGACGCGTGA

Protein sequence : 
MRILIVEDEPKAGDYLLKGLTESGFVVDLARDGVDGLAHAREQPYDLIVLDVMLPGMDGWSVLRELRRERDTPVLFLTAR
DELQDRLKGLELGADDYMVKPFAFAELVMRIRTILRRGPLRESEFIEVADLQIDAIRRRVSRSGQKIDLTSKEFALLYLL
ARRRGEVLSRSLIASQVWDVNFDSNTNVVDVSIRRLRAKVDDPFDHKLIHTRRGMGYVLDDGEPGLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-59 56
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-57 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0125 Protein 3e-71 67
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0197 Protein 6e-71 67
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0638 Protein 4e-61 62
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0083 Protein 9e-67 60
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0111 Protein 2e-63 60
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0308 Protein 9e-63 59
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0347 Protein 2e-55 54
Reut_B3961 YP_298161.1 heavy metal response regulator NC_007622.3794948.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_003923.1003417.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_013450.8614146.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002951.3238224.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_007793.3914065.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002758.1121390.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_010079.5776364.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002952.2859858.p0 Protein 5e-42 46
Reut_B3961 YP_298161.1 heavy metal response regulator AE015929.1.gene1106. Protein 1e-36 44
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002695.1.915041.p Protein 7e-25 42
Reut_B3961 YP_298161.1 heavy metal response regulator CP000034.1.gene3834. Protein 7e-25 42
Reut_B3961 YP_298161.1 heavy metal response regulator HE999704.1.gene2815. Protein 1e-31 42
Reut_B3961 YP_298161.1 heavy metal response regulator AE000516.2.gene3505. Protein 4e-32 42
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002695.1.916589.p Protein 6e-28 42
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0039 Protein 6e-28 42
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0596 Protein 6e-28 42
Reut_B3961 YP_298161.1 heavy metal response regulator CP000034.1.gene2186. Protein 6e-28 42
Reut_B3961 YP_298161.1 heavy metal response regulator CP001138.1.gene2239. Protein 6e-28 42
Reut_B3961 YP_298161.1 heavy metal response regulator CP001918.1.gene5135. Protein 1e-23 42
Reut_B3961 YP_298161.1 heavy metal response regulator CP000647.1.gene4257. Protein 5e-25 41
Reut_B3961 YP_298161.1 heavy metal response regulator CP001138.1.gene4273. Protein 6e-25 41
Reut_B3961 YP_298161.1 heavy metal response regulator CP004022.1.gene3215. Protein 6e-28 41
Reut_B3961 YP_298161.1 heavy metal response regulator BAC0533 Protein 5e-25 41
Reut_B3961 YP_298161.1 heavy metal response regulator HE999704.1.gene1528. Protein 4e-28 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002952.2859905.p0 Protein 1e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002758.1121668.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_009641.5332272.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_013450.8614421.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_007793.3914279.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_003923.1003749.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_007622.3794472.p0 Protein 1e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002745.1124361.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_009782.5559369.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator NC_002951.3237708.p0 Protein 2e-33 41
Reut_B3961 YP_298161.1 heavy metal response regulator CP000647.1.gene2531. Protein 9e-28 41
Reut_B3961 YP_298161.1 heavy metal response regulator CP001918.1.gene3444. Protein 4e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Reut_B3961 YP_298161.1 heavy metal response regulator VFG0596 Protein 4e-59 56
Reut_B3961 YP_298161.1 heavy metal response regulator VFG1389 Protein 1e-34 47
Reut_B3961 YP_298161.1 heavy metal response regulator VFG1386 Protein 4e-38 44
Reut_B3961 YP_298161.1 heavy metal response regulator VFG1390 Protein 2e-37 43
Reut_B3961 YP_298161.1 heavy metal response regulator VFG0473 Protein 6e-28 41