Gene Information

Name : Reut_B5100 (Reut_B5100)
Accession : YP_299292.1
Strain :
Genome accession: NC_007348
Putative virulence/resistance : Virulence
Product : ATPase FliI/YscN
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 1841722 - 1843188 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGACTGACGCTGCGACGGAAGCCCGGACCGAGGTGCCCGAACTGCCGCCGGCGCCCCACGCAAAGCACTGGCGCCATGC
CTTGAACAAGGCTTCGGCCGGCATCTCCGGCCTCGACAGCAAGCGCAGTTGCGGGCGACTCACGCGCGCGGCCGGCCTGG
TGCTGGAAGCCGTTGGCCTGCGACTGCCCGTGGGCAGCGACTGCCTGATCGAACTGCCCGCGGGGCAGTTCAGCGCCAAT
CTCGGCGGCCAGCGCACGGCGGAAGCCGAAGTCGTCGGCTTCGGCGCAGACCGCCTCTACCTGATGCCGCAGTCCGACGT
GGTTGGCCTGCTGCCCGGCGCGCGCGTCTATCCGCTCGAGCCGTCGCCGCAGCCGGAGGGCGCCAGCTCGCCGCGCGAGC
CGGGTTCCAAGCGCCTGCCGGTCGGCGAAGGCATGCTCGGCCGCGTGGTGGATGCCGCCGGCCGTCCGCTCGATGGCCTG
GGCCCGATCCGCGCCGCGCAGGAAGTCCCACTGTCCGCCGAACAGATCAACCCGCTGATGCGAGCGCCGATCCAGACGGT
GCTCGACACCGGCGTGCGCGCGATCAACGGCATGCTGACCGTGGGACGCGGCCAGCGCATGGGCCTGTTCGCGGGCTCCG
GCGTGGGCAAGAGCGTGCTGCTCGGCATGATGGCGCGCTACACCAGCGCAGACGTGATCGTGGTCGGCCTGATCGGCGAA
CGCGGCCGCGAGGTCAAGGAATTCATCGAACACATCCTCGGCCCCGAAGGCCGCGCCCGCTCGGTCGTGGTGGCGGCACC
GGCCGATTGCTCGCCGCTGCTGCGCATGCAGGGCGCCGCGTATTCGACGCGGCTGGCAGAGTACTTCCGTGACCAGGGCA
AGCATGTGCTGCTGATCATGGATTCGCTCACGCGCTACGCGATGGCCCAACGCGAGATCGCACTGGCGATCGGCGAGCCG
CCCGCCACCAAGGGCTATCCGCCTTCAGTGTTTGCCAAGCTGCCGACGCTGGTCGAGCGCACCGGCAACGGCCCGGAAGG
CGGCGGCTCGATCACGGCCTTCTATACCGTGCTGACCGAGGGCGACGACCAGCAGGACCCGATCGCCGACTCGGCGCGCG
CGATCCTGGACGGCCATGTGGTGCTCTCTCGCAGCCTGGCCGAGGCCGGCCACTATCCGGCCATCGACGTGGAAGCGTCG
ATCAGCCGCGCGATGACCGCGCTGATCCCGCCCGAGCAATTCAGCTCGGTGCGCCGCTTCAAGCAGCTGATGTCGCGCTA
CCAGCGCAACCGCGACCTGATCAGCGTGGGCGCTTACGTGCCCGGCAACGATCCCGAGCTGGATCTGGCGATCCGGCTCC
ATCCCCGGATGGAAGCCTTCCTGCAGCAGGACATCCACGAGCGCGCGGAATACGACGACGCGGTCGGGCAGCTGCATAGC
CTCTTCGACAGGAGCGAATATGGCTAA

Protein sequence :
MTDAATEARTEVPELPPAPHAKHWRHALNKASAGISGLDSKRSCGRLTRAAGLVLEAVGLRLPVGSDCLIELPAGQFSAN
LGGQRTAEAEVVGFGADRLYLMPQSDVVGLLPGARVYPLEPSPQPEGASSPREPGSKRLPVGEGMLGRVVDAAGRPLDGL
GPIRAAQEVPLSAEQINPLMRAPIQTVLDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGE
RGREVKEFIEHILGPEGRARSVVVAAPADCSPLLRMQGAAYSTRLAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEP
PATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDVEAS
ISRAMTALIPPEQFSSVRRFKQLMSRYQRNRDLISVGAYVPGNDPELDLAIRLHPRMEAFLQQDIHERAEYDDAVGQLHS
LFDRSEYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-74 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-74 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 8e-80 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-79 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-63 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-70 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-62 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-62 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-79 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-80 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-80 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-80 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-68 45
escN AAC38383.1 EscN Virulence LEE Protein 2e-74 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-74 45
escN AAC31513.1 L0034 Virulence LEE Protein 1e-74 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-74 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-74 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-74 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-74 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-68 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-68 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-64 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-68 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 6e-68 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-68 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-68 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-66 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 7e-74 44
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-73 44
escN AAK26715.1 EscN Virulence LEE Protein 2e-73 44
escN AAL57542.1 EscN Virulence LEE Protein 2e-73 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-74 44
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-74 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-67 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-71 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 3e-69 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 6e-70 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-70 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 7e-67 41
invC AAS66861.1 InvC Not tested SSR-2 Protein 7e-61 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-65 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-65 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-65 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG2499 Protein 1e-160 73
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG2331 Protein 3e-144 69
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG1254 Protein 5e-126 63
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG2144 Protein 3e-87 47
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0048 Protein 2e-85 45
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0192 Protein 6e-79 45
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0730 Protein 1e-74 45
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0812 Protein 8e-75 45
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0515 Protein 6e-69 44
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0390 Protein 6e-75 43
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG2459 Protein 5e-64 42
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG0555 Protein 4e-65 41
Reut_B5100 YP_299292.1 ATPase FliI/YscN VFG1778 Protein 4e-62 41