|
Name : xerD (Reut_A0577) Accession : YP_294803.2 Strain : Genome accession: NC_007347 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 629204 - 630121 bp Length : 918 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGTCGCCCTCGATGCGGCCATCGCCCCCGAACTCGATCTCGTCAGCCGTTTCTGCGACGCACTGTGGCTGGAGGATGG CCTGTCGCGCAACACCATGGACGCCTATCGGCGCGATCTGTCGATGCTCGCGCGCTGGCTGCATCAGTCCAGCAATGGCG GCTTGCTGGGCATCGGCGACACGGAACTGAACGCCTATTTCCTGGCGCGGCACCCCGAGACCCGCGCCTCATCCTCGAAC CGCCGGCTCGCTGTATTCCGCCGCTTCTACCAGTGGGCACTGCGCGAGCAAATGATCGAGGCCGATCCGTGCATCCTGCT GCGCCCCGCCAAGCAGCCGCCGCGCGTGCCCAAGACGCTAAGCGAAGCGCAGGTTGAAGCGCTGCTCGAAGCGCCCGACA CCACCACGCCGCTCGGCCTGCGCGACCGCACCATGCTCGAGCTGATGTACGCGAGCGGACTGCGCGTGTCGGAGCTGACG CAGATGAAAACCGTCGAGATCGGCCTGAACGAAGGCGTTGCGCGCGTGGTTGGCGGCAAGGGCGACAAGGAGCGGCTGGT GCCTTTCGGCATGCAGGCCAGCGACTGGCTGCGCCGCTATCTGGGGAGCGCGCGCCCTGCCCTTCTTGCCGGCCGCGCGT GCGACGCGCTATTCGTCACGCAGCGTGGCGAGGGCATGACGCGTCAGGCGTTCTGGCACCTGATCAAGCGCCATGCGCGC GATGCCGGCATTACCGCGCCGCTGTCGCCGCATACGCTGCGGCATGCGTTTGCCACGCACCTGCTGAACCACGGCGCCGA CCTGCGCGTGGTGCAACTGCTGCTTGGCCATGCCGATATCTCCACTACACAGATCTACACCCACGTGGCGCGCGAACGGC TGCGCGAACTGCACCAGCAGCACCATCCACGCGGGTAA Protein sequence : MVALDAAIAPELDLVSRFCDALWLEDGLSRNTMDAYRRDLSMLARWLHQSSNGGLLGIGDTELNAYFLARHPETRASSSN RRLAVFRRFYQWALREQMIEADPCILLRPAKQPPRVPKTLSEAQVEALLEAPDTTTPLGLRDRTMLELMYASGLRVSELT QMKTVEIGLNEGVARVVGGKGDKERLVPFGMQASDWLRRYLGSARPALLAGRACDALFVTQRGEGMTRQAFWHLIKRHAR DAGITAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRELHQQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-56 | 48 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-56 | 48 |
