Gene Information

Name : Reut_A2943 (Reut_A2943)
Accession : YP_297147.1
Strain :
Genome accession: NC_007347
Putative virulence/resistance : Virulence
Product : helix-turn-helix, Fis-type
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3227851 - 3229440 bp
Length : 1590 bp
Strand : -
Note : -

DNA sequence :
ATGCCACCCAGAACGCCTGGCCTCGATCCCATCCTCGTCATCGACGACGAGGCAGACTTGCGCGAGCTGCTGGACATTTC
CATCCGCCGCATGGGGCATGACGTGGTGCTGGCCGGCTCGCTGGCCGAAGCGCGCGAGAAGCTCGTACAGCAACGCTACA
GCCTGGTGCTGACCGATATGCGCCTTGGCGACGGCCTCGGTATCGAGATAGTGCGCCAGCTTGCGGCCGCGCCGGAACGT
GTGCCGGTGGCCGTCATCACCGCGTACGGGAGTGCCGACAACGCCGTCGAAGCGCTCAAGGCCGGTGCGTTCGACTACAT
TGCCAAGCCGGTGTCGCTGGACCAGTTGCGCAGCCTCGTGATGAATGCGCTTGGGCGCCAGCAACGCGAAGACCAGGACA
ACGCAGCCGCCGCGGAAGCCGCCCTGGCTGCAGACCGTGCCGCTGCGCTGTTGCCCGGCCACTCGGCGGCCATGCAGGAG
GTGCGCCGTTCGCTGTCGCGGCTCGCGCGCAGCATGGCACCGGTTGTGATCAGCGGCGAGTCGGGCAGCGGCAAGGAACG
CGCCGCGCGCGCCATCCACGCCACCAGCACGCGTGCCGCGCATCCGTTCGTGGCGGTGAACTGTGGCGCCATCCCTGAAA
ACCTGATGGAGTCCGAGTTCTTTGGCTACGTCAAAGGCGCGTTCACCGGCGCCGACGCCGAGCGCAACGGCTTCTTCCAG
GCCGCAAACGGCGGCACGCTGCTGCTCGACGAGGTGGCCGACCTGCCGCTGGCCATGCAGGTCAAGCTGCTGCGCGCGCT
GCAGGAGCGCCGCGTGCGCAAGATCGGCGCGAGCCGCGAAGATGCCGTCGATGTGCGCGTGATGTGCGCGAGCCACAAGG
ACCTGGCCGCGATGGTCGCGGCCGGTCAGTTCCGGCAGGATTTGTACTACCGGCTCAATGTGCTGGGTTTGCGCATGCCG
ACGCTGCGCGAGCGCGCCGAGGACATTCCCGTGCTGGCCCGCGCCATCCTCGAACACCTGGCCGTGCGTTACAGCGACCC
GCGCCCGCGCCGGCTGTCGCAGGCCGCGCTGGAGCGGCTGGTGGCGTATCCGTTTCCGGGCAACGTCCGCGAACTGGAAA
ACCTGCTCGAACGCGCCTACGCGTTTGCCGAGGCCGAGGATATCCAGGTGGAAGACCTGGGGCCGCTCGACGCCAATATG
GAGCACGCGGCGCTGCGTCCCGCGCCGTCGCCGCTTACGCCGTACACGCCATGGGCCGGCGGCCTGGCGCCAGCGGAGCC
CGCTCCGGCACCCGAGCCCACGCCACAGGCCGCCACCGCGCCAGAGTCCGAGGCCATCGTCGTGCCGGCCGACCTGCCTG
ATACCGCCGAACGCGCTTGCCGTGGCGTCACGTTCCCGATCGATCTGCCAGCCCGGCTGGAAGACGTGGAGCGCGAGATC
ATCCTGCAGGCGCTGGCCCAGACCGGCTTCAATCGCACCGCTGCCGCGCCGCTGCTGGGGCTGAACCTGCGCCAGTTGCG
CTACCGCATCCAGCAACTCGGTATCCGCGACGGGCGCGATGAACGCGAGGAAGGGGAGGGCGCGGCATGA

Protein sequence :
MPPRTPGLDPILVIDDEADLRELLDISIRRMGHDVVLAGSLAEAREKLVQQRYSLVLTDMRLGDGLGIEIVRQLAAAPER
VPVAVITAYGSADNAVEALKAGAFDYIAKPVSLDQLRSLVMNALGRQQREDQDNAAAAEAALAADRAAALLPGHSAAMQE
VRRSLSRLARSMAPVVISGESGSGKERAARAIHATSTRAAHPFVAVNCGAIPENLMESEFFGYVKGAFTGADAERNGFFQ
AANGGTLLLDEVADLPLAMQVKLLRALQERRVRKIGASREDAVDVRVMCASHKDLAAMVAAGQFRQDLYYRLNVLGLRMP
TLRERAEDIPVLARAILEHLAVRYSDPRPRRLSQAALERLVAYPFPGNVRELENLLERAYAFAEAEDIQVEDLGPLDANM
EHAALRPAPSPLTPYTPWAGGLAPAEPAPAPEPTPQAATAPESEAIVVPADLPDTAERACRGVTFPIDLPARLEDVEREI
ILQALAQTGFNRTAAAPLLGLNLRQLRYRIQQLGIRDGRDEREEGEGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-76 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-76 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Reut_A2943 YP_297147.1 helix-turn-helix, Fis-type BAC0089 Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Reut_A2943 YP_297147.1 helix-turn-helix, Fis-type VFG1214 Protein 1e-88 56
Reut_A2943 YP_297147.1 helix-turn-helix, Fis-type VFG0116 Protein 5e-56 41