Gene Information

Name : PMN2A_0038 (PMN2A_0038)
Accession : YP_291233.1
Strain : Prochlorococcus marinus NATL2A
Genome accession: NC_007335
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 591968 - 592765 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCCAATTTTTAAAAGCCATGAGAAAGATTTTATGCGTATTGAGGCAGACCAAGTTTGTGTTGACTACAACGGTAC
AGTTGCTCTCTATGACGCAAGTTTAAATTTAAAAGCTGGATCTATATGTGGCCTTGTGGGCATGAATGGCGCAGGAAAAT
CAACTTTTTTCAAGGCTCTGATGGGTTTTGTTAGACCTTCAAGGGGGAAAATTAGGATCAATGGTATAAAGGTTAATCAA
GCCCAGAAGGAACAATCAGTTGCATATGTTCCACAAAATGAAGGAATAGATTATTCATTTCCAGTGAGTGTTTGGGATGT
TGTGATGATGGGCCGATATGGTGCTATGAATATTTTTCGAATACCAAGAGAGTCAGATAGAAGAGCAGTTGTTCATGCTC
TTGAGAGAGTTGATCTTTTTGATCTCAGAGAAAGACCAATAGGATCTTTATCTGGAGGGCAACGCAAAAGAGCTTTTCTT
GCAAGAGCAATTGCTCAACGGGCATCAGTACTTCTATTAGACGAGCCTTTTTCTGGAGTTGATGTACCCACTGAAAAGCT
TATGGCTGAGCTATTTCTTCAGTTTCGACAAGAAGGGCATACTATTTTGATATCCACTCATGATTTGAATCATGTGCGAG
ATTTTTGTGATTTTGTTGTCCTTATCAATAAGACAGTTCTTGCGTATGGTGAAACCTCGGAGGTCTTTACTTCAGAAAAT
CTAAATAAAACATTTGGAGGAATCCCACCAAACCCTTTATCAGGTCCAACGTCAAGTAAAGATTTTATAAATGAGTGA

Protein sequence : 
MNPIFKSHEKDFMRIEADQVCVDYNGTVALYDASLNLKAGSICGLVGMNGAGKSTFFKALMGFVRPSRGKIRINGIKVNQ
AQKEQSVAYVPQNEGIDYSFPVSVWDVVMMGRYGAMNIFRIPRESDRRAVVHALERVDLFDLRERPIGSLSGGQRKRAFL
ARAIAQRASVLLLDEPFSGVDVPTEKLMAELFLQFRQEGHTILISTHDLNHVRDFCDFVVLINKTVLAYGETSEVFTSEN
LNKTFGGIPPNPLSGPTSSKDFINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-55 57
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-55 57
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-55 56
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-55 56
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-55 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMN2A_0038 YP_291233.1 ABC transporter ATP-binding protein BAC0350 Protein 9e-56 56
PMN2A_0038 YP_291233.1 ABC transporter ATP-binding protein BAC0440 Protein 9e-64 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PMN2A_0038 YP_291233.1 ABC transporter ATP-binding protein VFG0526 Protein 8e-56 56