Gene Information

Name : Tfu_0812 (Tfu_0812)
Accession : YP_288873.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 959602 - 960231 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence :
ATGATCACCGTCAAAAACCTCACCAAGTCCTTCGGCACACGCACCCTCTGGCGCAACCTCAACCTCACCGTCCCCGCAGG
ACGGATGCTCGCCCTCGTCGGCGCCAGCGGGTCAGGAAAAACCACGCTGCTCAACTGCATCGGCCTCCTCGAACGGCCGA
GCAGCGGCCACATCCTGTTCGACAACACCGACCTGACCCGGCTCGGCCCCGGCGGACGACGCCGATTCCGCCGCGACAAA
CTCGGCTACCTCTTCCAGGACTACGCGCTCATCGACAACGCCACCGTCAAAGCCAACCTTGATGTTGCTCGCAGACGCGG
CACCCGCCCCGACTACGCGCGCATCCTCGAACGCGTCGGCCTCGCAGGACGCGAAAACGAGAAAGTGCACTACCTATCCG
GTGGAGAACAGCAGCGCGTCGCTCTCGCCCGACTCATGGTCAAACAGCCCACCCTGGTGCTAGCCGACGAACCCACCGGG
GCCCTAGACAGCGCCAACAGCGCAATGGTGGTGAACGTGCTCCGTGAGATGAGCGAACAAGGCTGCGCGGTCGTCATCGC
CACCCACAACGACGGTGTGCGCGACGCCTGCGACCTCGTCTTCGACGTCCACGAACAGCGGGAACTGTGA

Protein sequence :
MITVKNLTKSFGTRTLWRNLNLTVPAGRMLALVGASGSGKTTLLNCIGLLERPSSGHILFDNTDLTRLGPGGRRRFRRDK
LGYLFQDYALIDNATVKANLDVARRRGTRPDYARILERVGLAGRENEKVHYLSGGEQQRVALARLMVKQPTLVLADEPTG
ALDSANSAMVVNVLREMSEQGCAVVIATHNDGVRDACDLVFDVHEQREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_0812 YP_288873.1 peptide ABC transporter ATPase NC_012469.1.7686946. Protein 2e-26 41