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Name : Tfu_0031 (Tfu_0031) Accession : YP_288092.1 Strain : Thermobifida fusca YX Genome accession: NC_007333 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 35195 - 36463 bp Length : 1269 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATCGACCTTCGAGCTCTACGGGAAGACCCTGACCGTTTGCGCGCGTCGCAGCGGGCACGCGGCGAAGACGAATCTGT CGTCGACCGGCTGCTGGATCTGGACTCGCGGCACCGCGCCGCCCTGGCGCGTTTCGAAACGTTGCGCGCCGAACAGAAAA GCGTCGGCAAGTCTGTTTCCCGCGCCTCCGCAGAGGAGCGGGAAGCGCTGCTGAACCGGGCGAAGAGTCTGGCGTCCGAG GTCAAATCCGCTGAGGCTGAGGCCGAAGCGCTCTCCGACGAGCTCACCACACTGCTGCGTTCCGTGCCGAACGTGGTGGA AAGCGACGCGCCGGTGGGCGGGGTTGACGACTTTGTCGTGGTCGAAGAGGTCGGCACGCCCCGCCAGTTCGACTTCACCC CCCGCGACCACCTGGAACTGGGTGAGATGCTCGGCGCCATCGACACGGAGCGGGGCGCCAAAGTGTCGGGGGCGCGGTTC TACTTCCTCACCGGTGTCGGCGCGCTGCTGGAACTGGGCCTGCTCAACTTGGCGATGCAGCGGGCCGTCGCCAACGGCTT CACCCCGATGATCCCGCCGGTGCTGGTCAAACCGGAGACCATGGACGGCACCGGGTTCCTCGGGGAGCACGCTGCGGAGG TCTACCACCTTCCCGCCGACGACCTGTACCTGGTGGGCACCTCCGAGGTGCCGCTGGCCGGGTACCACGCGAACGAGATC CTGCCCGCTGACGCCCTGCCGACCCGCTACATCGGCTGGTCGTCGTGCTTCCGCCGGGAGGCGGGCTCCTACGGCAAGGA CACGCGCGGCATCATCCGGGTCCACCAGTTCAACAAGGTGGAGATGTTCGTCTACGCTCACCCGGACGAGGCGCACGAGG AGCATCTGCGGCTGCTCGCGTGGGAACGCGAGATGCTTGACCTGATCGAGGTGCCCTACCGGGTGGTGGACATCGCCGCC GGTGACCTGGGGACGAGCGCGGCACGCAAGTACGACTGCGAGGCGTGGCTTCCCAGCCAGGGCCGCTACCGCGAGCTCAC GTCCACGTCGAACTGCACCGAGTTCCAGTCCCGCCGTCTCAACATCCGCTACCGCGACACTGACGGCAAGCCGCGGTTCG TGGCCACGCTCAACGGCACGCTGGCCACCACGCGGTGGATTGTCGCGATCTTGGAGAACCACCAGCAGGAGGACGGTTCC GTGGTGGTGCCTGAGGCGCTCCGTCCGTTCGTGGGCCAGGACGTGCTGCACCCGATCGCGAAGAAGTAG Protein sequence : MIDLRALREDPDRLRASQRARGEDESVVDRLLDLDSRHRAALARFETLRAEQKSVGKSVSRASAEEREALLNRAKSLASE VKSAEAEAEALSDELTTLLRSVPNVVESDAPVGGVDDFVVVEEVGTPRQFDFTPRDHLELGEMLGAIDTERGAKVSGARF YFLTGVGALLELGLLNLAMQRAVANGFTPMIPPVLVKPETMDGTGFLGEHAAEVYHLPADDLYLVGTSEVPLAGYHANEI LPADALPTRYIGWSSCFRREAGSYGKDTRGIIRVHQFNKVEMFVYAHPDEAHEEHLRLLAWEREMLDLIEVPYRVVDIAA GDLGTSAARKYDCEAWLPSQGRYRELTSTSNCTEFQSRRLNIRYRDTDGKPRFVATLNGTLATTRWIVAILENHQQEDGS VVVPEALRPFVGQDVLHPIAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-62 | 42 |
