Gene Information

Name : Tfu_2910 (Tfu_2910)
Accession : YP_290966.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3425002 - 3425694 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
GTGACGCGTGTACTCGTCGTTGAAGACGAGGAATCCTACAGCGATGCCCTGTCGTACCTGCTTCGCAAGGAAGGCTTCGA
GGTCGCCGTTGCCCCGACTGGAACGAGTGCTCTAGAGATCTTCGACCGTACCGGTGCTGATCTCGTCCTTCTCGACCTGA
TGCTGCCGGGCCTGTCCGGTACCGAGGTGTGCCGCACCCTGCGACAGAAGTCTAACGTCCCGGTGATCATGCTCACCGCC
AAAGACAGCGAGATCGACAAAGTCGTCGGTCTCGAACTGGGTGCAGACGACTATGTGACCAAGCCCTTCTCGTCGCGGGA
GCTGGTGGCCCGGATCCGCGCGGTGCTGCGCCGCCGCACCGCGGACGACACGGTGCTGCCCAGCGTCCTGGAAGCCGGGC
CGGTCCGCATGGACGTGGAGCGCCACGTGGTGACGGTGCGCGGGGAAAACGTGCAGCTTCCTCTCAAAGAGTTCGAGCTG
CTGGAAGTCCTGCTCCGCAACGCCGGCCGGGTGCTGACCCGTCCGCAACTGATCGACCGGGTCTGGGGGGCCGACTACGT
GGGGGACACCAAAACCCTCGACGTCCACATCAAGCGGCTGCGCGCCAAGATCGAAACCGATCCCAGCAAACCGCAGCACA
TCATCACGGTCCGGGGCTTGGGCTACAAGTTCGAGCCCGAACCGGCTACGTGA

Protein sequence : 
MTRVLVVEDEESYSDALSYLLRKEGFEVAVAPTGTSALEIFDRTGADLVLLDLMLPGLSGTEVCRTLRQKSNVPVIMLTA
KDSEIDKVVGLELGADDYVTKPFSSRELVARIRAVLRRRTADDTVLPSVLEAGPVRMDVERHVVTVRGENVQLPLKEFEL
LEVLLRNAGRVLTRPQLIDRVWGADYVGDTKTLDVHIKRLRAKIETDPSKPQHIITVRGLGYKFEPEPAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2910 YP_290966.1 response regulator receiver AE000516.2.gene3505. Protein 2e-36 50
Tfu_2910 YP_290966.1 response regulator receiver NC_002952.2859905.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_002951.3237708.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_002758.1121668.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_007622.3794472.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_009641.5332272.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_013450.8614421.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_007793.3914279.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_003923.1003749.p0 Protein 3e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_002745.1124361.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_009782.5559369.p0 Protein 2e-36 49
Tfu_2910 YP_290966.1 response regulator receiver NC_012469.1.7685629. Protein 1e-38 47
Tfu_2910 YP_290966.1 response regulator receiver HE999704.1.gene2815. Protein 9e-35 47
Tfu_2910 YP_290966.1 response regulator receiver NC_012469.1.7686381. Protein 6e-34 46
Tfu_2910 YP_290966.1 response regulator receiver BAC0125 Protein 1e-25 43
Tfu_2910 YP_290966.1 response regulator receiver AE015929.1.gene1106. Protein 1e-21 42
Tfu_2910 YP_290966.1 response regulator receiver BAC0197 Protein 5e-23 42
Tfu_2910 YP_290966.1 response regulator receiver AE016830.1.gene1681. Protein 2e-37 42
Tfu_2910 YP_290966.1 response regulator receiver BAC0308 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2910 YP_290966.1 response regulator receiver VFG1386 Protein 2e-22 44
Tfu_2910 YP_290966.1 response regulator receiver VFG1389 Protein 5e-22 43