Gene Information

Name : Tfu_2549 (Tfu_2549)
Accession : YP_290605.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3003672 - 3004340 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTGCGTTTTGCTGGCCGAAGACGATGCTTCGATCTCTGAACCGTTGGCCCGCGCGCTCCGGCGGGAAGGATATTC
AGTCGACGTCACCGTCGACGGTATGGAAACACTCGACCGTGCCCGTAGCGGCGACATCGACCTGCTCGTCTTGGACTTGG
GATTGCCCGAACTGGACGGGCTCGAAGTAGCCCGGCGGCTGCGTTCCGAAGGGCACGGAACTCCGATTCTCATCCTCACC
GCCCGGGCCGACGAGGTGGACACCGTCGTCGGACTGGACGCGGGGGCCGACGACTACGTCACCAAACCCTTCCGCCTGGC
AGAGCTGCTGGCCCGGGTCCGGGCCCTGCTGCGCCGCGGCGGCGGCGAAGTCCCCGTCGTCCACGGGGTGCGCATCGACA
CGGACTCCCGCCGGGCCTGGCTCGGCGACCGCGAACTGCAACTGACCACGAAAGAGTTCGACCTGCTGCGGGTCCTGGTC
CGCGAAGCGGGCAAGGTGGTCACCCGGGAGCAGATCATGCGGGAGGTATGGGACACCAACTGGTGGGGGTCCACGAAAAC
ACTGGACATGCACATTTCCTGGCTGCGCCGGAAGCTCGGCGACGACGCCAACCAGCCCTCCTACATCACTACGGTGCGGG
GGGTCGGCTTCCGGTTCGAGAAGGAGTGA

Protein sequence : 
MTCVLLAEDDASISEPLARALRREGYSVDVTVDGMETLDRARSGDIDLLVLDLGLPELDGLEVARRLRSEGHGTPILILT
ARADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGGGEVPVVHGVRIDTDSRRAWLGDRELQLTTKEFDLLRVLV
REAGKVVTREQIMREVWDTNWWGSTKTLDMHISWLRRKLGDDANQPSYITTVRGVGFRFEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2549 YP_290605.1 response regulator receiver NC_007793.3914065.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_002758.1121390.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_010079.5776364.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_002952.2859858.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_007622.3794948.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver AE015929.1.gene1106. Protein 3e-18 43
Tfu_2549 YP_290605.1 response regulator receiver NC_003923.1003417.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_013450.8614146.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver NC_002951.3238224.p0 Protein 3e-22 43
Tfu_2549 YP_290605.1 response regulator receiver BAC0197 Protein 2e-17 43
Tfu_2549 YP_290605.1 response regulator receiver NC_009782.5559369.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_002951.3237708.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_002758.1121668.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_009641.5332272.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_013450.8614421.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_007793.3914279.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_003923.1003749.p0 Protein 6e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_002745.1124361.p0 Protein 5e-27 42
Tfu_2549 YP_290605.1 response regulator receiver NC_002952.2859905.p0 Protein 7e-27 41
Tfu_2549 YP_290605.1 response regulator receiver NC_007622.3794472.p0 Protein 7e-27 41
Tfu_2549 YP_290605.1 response regulator receiver HE999704.1.gene2815. Protein 4e-26 41
Tfu_2549 YP_290605.1 response regulator receiver AE000516.2.gene3505. Protein 2e-24 41
Tfu_2549 YP_290605.1 response regulator receiver BAC0487 Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2549 YP_290605.1 response regulator receiver VFG1390 Protein 1e-24 45
Tfu_2549 YP_290605.1 response regulator receiver VFG0596 Protein 2e-16 42
Tfu_2549 YP_290605.1 response regulator receiver VFG1389 Protein 7e-22 41