Gene Information

Name : Tfu_2496 (Tfu_2496)
Accession : YP_290552.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2941451 - 2942128 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGGACGCGTGCTGGTCGTCGACGACGACCTCGCTCTGGCCGAAATGCTGGGCATCGTGCTCAGAGGCGAAGGCTT
CGAGCCGTCGTTCGTGCACGACGGGGACAAAGCCCTGGAGGCCTTCCGCGAGACCAAACCCGACCTGGTGCTGCTGGACC
TCATGCTTCCCGGTGCGGACGGCATCGATGTGTGCCGCCAGATCCGCGCCGAGTCCGGAGTGCCCATCGTGATGCTCACC
GCGAAGAGCGACACGGTGGACGTGGTGCTCGGCTTGGAGTCCGGTGCCGACGACTACATCGTCAAACCGTTCAAACCCAA
GGAACTGGTGGCCCGGATCCGGGCTCGGCTGCGCCGTACCGAGGAGCCCGCACCCGAGATCCTGCAGATCGGTGACATCA
CCATCGATGTCGCCGGACACTCGGTCCGCCGCGGCGACCAGGTCATCAACCTCACCCCCCTGGAGTTCGACCTGCTCGTG
GCGCTCGCCCGCAAGCCGCGCCAGGTCTTCACCCGCGAAGTCCTCCTGGAGCAAGTGTGGGGATACCGGCACGCCGCGGA
CACCCGCCTGGTCAACGTGCACGTCCAACGGCTCCGCGCCAAGATCGAGAAGGACCCCGAGCACCCGGAGATCGTGGTCA
CGGTGCGGGGGGTCGGATACAAGGCCGGTTCTCCCTGA

Protein sequence :
MKGRVLVVDDDLALAEMLGIVLRGEGFEPSFVHDGDKALEAFRETKPDLVLLDLMLPGADGIDVCRQIRAESGVPIVMLT
AKSDTVDVVLGLESGADDYIVKPFKPKELVARIRARLRRTEEPAPEILQIGDITIDVAGHSVRRGDQVINLTPLEFDLLV
ALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKIEKDPEHPEIVVTVRGVGYKAGSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2496 YP_290552.1 response regulator receiver AE000516.2.gene3505. Protein 5e-79 76
Tfu_2496 YP_290552.1 response regulator receiver NC_002952.2859905.p0 Protein 5e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_007793.3914279.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_007622.3794472.p0 Protein 7e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_002745.1124361.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_009782.5559369.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_002951.3237708.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_003923.1003749.p0 Protein 7e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_002758.1121668.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_009641.5332272.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_013450.8614421.p0 Protein 9e-47 46
Tfu_2496 YP_290552.1 response regulator receiver NC_012469.1.7686381. Protein 3e-44 45
Tfu_2496 YP_290552.1 response regulator receiver NC_012469.1.7685629. Protein 1e-44 45
Tfu_2496 YP_290552.1 response regulator receiver BAC0125 Protein 3e-35 45
Tfu_2496 YP_290552.1 response regulator receiver NC_002952.2859858.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_007622.3794948.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_003923.1003417.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_013450.8614146.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_002951.3238224.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_007793.3914065.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_002758.1121390.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver NC_010079.5776364.p0 Protein 6e-41 44
Tfu_2496 YP_290552.1 response regulator receiver HE999704.1.gene2815. Protein 3e-43 44
Tfu_2496 YP_290552.1 response regulator receiver AE015929.1.gene1106. Protein 2e-36 43
Tfu_2496 YP_290552.1 response regulator receiver CP000034.1.gene2186. Protein 1e-40 43
Tfu_2496 YP_290552.1 response regulator receiver NC_002695.1.916589.p Protein 7e-41 43
Tfu_2496 YP_290552.1 response regulator receiver CP001138.1.gene2239. Protein 5e-41 43
Tfu_2496 YP_290552.1 response regulator receiver BAC0039 Protein 1e-40 43
Tfu_2496 YP_290552.1 response regulator receiver BAC0596 Protein 5e-41 43
Tfu_2496 YP_290552.1 response regulator receiver CP001918.1.gene3444. Protein 7e-41 43
Tfu_2496 YP_290552.1 response regulator receiver AE016830.1.gene1681. Protein 8e-42 42
Tfu_2496 YP_290552.1 response regulator receiver CP000647.1.gene2531. Protein 7e-41 42
Tfu_2496 YP_290552.1 response regulator receiver CP000675.2.gene1535. Protein 9e-36 41
Tfu_2496 YP_290552.1 response regulator receiver HE999704.1.gene1528. Protein 1e-36 41
Tfu_2496 YP_290552.1 response regulator receiver FJ349556.1.orf0.gene Protein 8e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2496 YP_290552.1 response regulator receiver VFG1390 Protein 1e-37 44
Tfu_2496 YP_290552.1 response regulator receiver VFG1389 Protein 1e-31 44
Tfu_2496 YP_290552.1 response regulator receiver VFG1702 Protein 1e-39 41