Gene Information

Name : Tfu_2385 (Tfu_2385)
Accession : YP_290441.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : FecCD-family membrane transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2808149 - 2809252 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCTCGCCGCCAAGCAGGCGGACCCGCTCCCCGCTTCCCGCCCCGACAGCACCCAGGTCCGCCGCGCCACCGTGCT
GCGCGGCACCGTCCTGCTGACCGTCCTCGCCATCGCCCTCGGCGCCGTGGCCCTCGTCGCCGCGGGCATCGGCGCCTACC
ACATTCCCCCGCTCGAAGTCGCCGGATCGGTCTTCCGCGGCCTGGGCCTCGACTGGGGTGAGGCCGCCGACCCGCTCGCC
GACGAGGTGCTGTGGAACGTCCGCTTCCCCCGCGTCGTCCTCGCCATGATCGTCGGTTCTTCCCTGGCGCTCGCCGGGGC
CATGATGCAGGGCATCTTCGGCAACCCGCTCGCCGAGCCCGGCGTCATCGGGGTCTCCTCAGGCGCCACCGTGGGCGCGG
TCCTCATCATCGCGCTCGGCGCTTCCGCGCTGGGGTACTGGACGGTCATCGTCGCGTCCTTCCTCAGCGGGATGGTCACC
ACCGTGCTCGTCTACGTGCTGTCCCGCTCGGGGGGACGCACCGAGGTCGTCACCCTGCTGCTCACCGGGATCGCGGTCAA
CGCGGTCGCCGGGGCGCTCATCGGCGCCGCCACCTACTTCTCCGAAGACGCGGAACTGCGGTCGATCACCAACTGGCAGA
TGGGCAGCTTGGCCGCGGCCACCTGGTTCAAAGTGGCCGCCGCGCTGCCGCTGGCCGTGGCGGGGATCATCGCGGCACCG
TTCTTCGCCCGCCGCCTCGACTTGCTCTCCCTCGGCGAAAGCCCGGCCCGCCACCTGGGCGTCGACGTAGAGCGGATGCG
CCAGGCGCTGATCGTCGTCATCGCGATGCTCACCTCGTCTGCCGTGGCGTTCGCCGGGATCATCAGCTTCGTCGGCCTGG
TCGTGCCCCACATGGTGCGGATGATCGCCGGGCCGGGGCACCGCGTACTGCTCCCAGCGAGCGTGCTGGGCGGCGCCCTC
GTCCTCGTCGCCGCGGACCTGGTCGCCCGGGTCGCTGCCGCCCCCCAGGAGGTGCCTTTGGGCATCATCACCGCACTGGT
CGGCGGCCCGTTCTTCTTCTGGCTGCTGTACCGGACCCGCGCCAGACAGGGAGGTTGGGCATGA

Protein sequence : 
MTLAAKQADPLPASRPDSTQVRRATVLRGTVLLTVLAIALGAVALVAAGIGAYHIPPLEVAGSVFRGLGLDWGEAADPLA
DEVLWNVRFPRVVLAMIVGSSLALAGAMMQGIFGNPLAEPGVIGVSSGATVGAVLIIALGASALGYWTVIVASFLSGMVT
TVLVYVLSRSGGRTEVVTLLLTGIAVNAVAGALIGAATYFSEDAELRSITNWQMGSLAAATWFKVAAALPLAVAGIIAAP
FFARRLDLLSLGESPARHLGVDVERMRQALIVVIAMLTSSAVAFAGIISFVGLVVPHMVRMIAGPGHRVLLPASVLGGAL
VLVAADLVARVAAAPQEVPLGIITALVGGPFFFWLLYRTRARQGGWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2385 YP_290441.1 FecCD-family membrane transport protein BAC0163 Protein 9e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_2385 YP_290441.1 FecCD-family membrane transport protein VFG1043 Protein 8e-26 42
Tfu_2385 YP_290441.1 FecCD-family membrane transport protein VFG0922 Protein 4e-42 42