|
Name : leuS (Tfu_2156) Accession : YP_290212.1 Strain : Thermobifida fusca YX Genome accession: NC_007333 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.4 Position : 2526315 - 2528807 bp Length : 2493 bp Strand : - Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGACAGCGGTTAGCGGCGATCAGACGACGAGTGGCTCCTACGACGTCCGGGCACTCCAGGAGAAGTGGCAGGCCCGGTG GGCAAAGGAGAACCCCTTCACGGCTAGCGAAGACCCGGCCGACCCCCGTCCGCGACGCTATGTGCTCGACATGTTCCCCT ACCCCTCAGGTGACCTCCACATGGGGCACGCTGAGGCGTTCGCGATCGGCGACGTCATCGCGCGCTACCACTTCGCGCGC GGGGAGAACGTGCTGCACCCGATCGGCTGGGACTCTTTCGGCCTGCCCGCGGAGAACGCCGCCATCAAACACAACTTCCA CCCGGCCGAGTGGACCTACACCAACATTGAGACCCAGGCCGAGTCGTTCCGGCGCTACGCCATCTCTTTGGACTGGTCCC GTCGTCTGCACACCAGCGACCCCGAGTACTACCGCTGGAACCAGTGGTTCTTCCTCCGGTTCTTCGAACGCGGTCTGGCC TACCGCAAGGACGGCCTGGTCAACTGGTGCCCCAAGGATCAGACCGTGCTCGCCAATGAGCAGGTCATCCAGGGCAAGTG CGAGCGCTGCGGCACCGAGGTCGAGCGGCGGGCGCTCAACCAGTGGTACTTCAAGATCACGGACTACGCCCAGCGGCTGC TGGACGACATGGAGCAGCTCGAGGGCAAGTGGCCCGAGCGCGTGCTGACCATGCAGCGCAACTGGATCGGCCGTTCGGAA GGCGCTGACGTCCAGTTCACTATCGAAGGCCGCGAGGAACCGGTCACCGTCTTCACTACGCGACCCGACACCCTGTACGG GGCGACGTTCTTCGTGGTCGCCCCCGACTCGCCGCTGGCCGACGAACTGTGCGCGCCTGAACAGCGGGAAGCGTTCGAGG CCTACCGCACCCAGGTCAGCAAGCTGAGTGACATCGAACGCCAGTCGACCGAGCGGGAGAAGACCGGCGTCTTCCTGGGC CGCTACGCGATCAACCCGGTCAACGGGGAGCGCATCCCGGTCTGGGCGGCCGACTACGTACTGGCCGACTACGGCCACGG CGCGATCATGGCGGTGCCCGCACACGACCAGCGCGACCTGGACTTCGCCCGCAAGTTCAACCTGCCGGTCCGTGTTGTCG TGGACACGGGCGAGCCCGACCCCGCTGAGACGGGGATCGCCACCCCCGGGGAGGGCACGCTCATCAACTCCGGTCCGCTG AACGGCCTCAGCAAGAGCGAAGCGATCCCCCGCATCATCGAGATCCTCACCGAACGCGGCACCGGCAAGGCCGCCGTCAA CTACCGGCTGCGCGACTGGCTGGTGTCCCGCCAGCGGTTCTGGGGCACTCCCATTCCGATCATCCACTGCCCGGAGTGCG GCGAAGTTCCGGTCCCCGACGAAGAACTGCCGGTGCGCCTGCCCGACCTGCGCGGGGCTGCCCTAGCCCCCAAGGGGGTC TCCCCGCTGGCCGCCGCCACCGACTGGGTCAACGTGTCCTGCCCCCGCTGCGGCGGGCCCGCCAAACGGGACACGGACAC GATGGACACCTTCGTCGACTCCTCCTGGTACTTCTTGCGCTACTGCTCGCCCAACCTGGACACCGCGCCGTTCGACCAGG AGAAAGTCGCCAAGTGGGGACCGATCGACCAGTACGTCGGCGGTGTCGAGCACGCGATCCTGCACCTGCTCTACAGCAGG TTCTTCACCAAGGTCCTCTACGACATGGGCATGGTGCCGTTCACCGAGCCCTTCGTCCGGCTGCTCAACCAGGGCCAGGT CATCAACCAGGGCAAGGCCATGTCCAAGTCGCTGGGCAACGGTGTGGACCTGGGGCAGGAGATCGACCGCTACGGGGTTG ACGCCGTCCGGCTGACCATGGTGTTTGCCGGGCCGCCGGAGGAAGACATCGACTGGGCAGACGTGTCCCCGGGGGCATCG GTGAAGTTCCTCAACCGTGCCTACCGGGTGATGGCGGAGGCCGCAGCCGCCTCTGCACCGGGGGTGGACCCGGCCACCGG CGACCTGGCGCTGCGGCGGATGACCCACCAGACCCTGGCGAAGGTTACCGAGGCCGTGGAAGCCCAGCGGTTCAACGTCG CCATCGCGCGGATCATGGAACTCGTCACCGCTGCTCGCCGGGCGATCGACTCGGGCCCTGGCGCCGCCGACCCCGCGGTG CGTGAAGCCGCTGAGGTGATTGCGATCACCTTGGGTCTGTTCGCTCCCTACGTCGCCGAGGAAGGCTGGGAGATGCTCGG CCACACCGGATCGGTGTCGGTGGGCACCTGGCGGGAGCCCGACCCTGCGCTCCTGGTCCAGGAGAGCGTGACGTGCGTGG TCCAGGTGGCCAGCAAGGTCCGCGACAAGCTGCAGGTCTCCCCGGACATTTCCGCGGAAGAGCTGGAGCGGCTGGCCCTC GCCTCGGAGAAGGTCCAGAATCACATCGCCGGACGTGAGATCCGCAGGATCGTGGTCCGTGAGCCCAAACTGGTCAACAT CGTGGTCGCCTAA Protein sequence : MTAVSGDQTTSGSYDVRALQEKWQARWAKENPFTASEDPADPRPRRYVLDMFPYPSGDLHMGHAEAFAIGDVIARYHFAR GENVLHPIGWDSFGLPAENAAIKHNFHPAEWTYTNIETQAESFRRYAISLDWSRRLHTSDPEYYRWNQWFFLRFFERGLA YRKDGLVNWCPKDQTVLANEQVIQGKCERCGTEVERRALNQWYFKITDYAQRLLDDMEQLEGKWPERVLTMQRNWIGRSE GADVQFTIEGREEPVTVFTTRPDTLYGATFFVVAPDSPLADELCAPEQREAFEAYRTQVSKLSDIERQSTEREKTGVFLG RYAINPVNGERIPVWAADYVLADYGHGAIMAVPAHDQRDLDFARKFNLPVRVVVDTGEPDPAETGIATPGEGTLINSGPL NGLSKSEAIPRIIEILTERGTGKAAVNYRLRDWLVSRQRFWGTPIPIIHCPECGEVPVPDEELPVRLPDLRGAALAPKGV SPLAAATDWVNVSCPRCGGPAKRDTDTMDTFVDSSWYFLRYCSPNLDTAPFDQEKVAKWGPIDQYVGGVEHAILHLLYSR FFTKVLYDMGMVPFTEPFVRLLNQGQVINQGKAMSKSLGNGVDLGQEIDRYGVDAVRLTMVFAGPPEEDIDWADVSPGAS VKFLNRAYRVMAEAAAASAPGVDPATGDLALRRMTHQTLAKVTEAVEAQRFNVAIARIMELVTAARRAIDSGPGAADPAV REAAEVIAITLGLFAPYVAEEGWEMLGHTGSVSVGTWREPDPALLVQESVTCVVQVASKVRDKLQVSPDISAEELERLAL ASEKVQNHIAGREIRRIVVREPKLVNIVVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 3e-163 | 44 |
