|
Name : Tfu_1871 (Tfu_1871) Accession : YP_289927.1 Strain : Thermobifida fusca YX Genome accession: NC_007333 Putative virulence/resistance : Virulence Product : 2,3-dihydroxybenzoate-AMP ligase Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG1021 EC number : - Position : 2193191 - 2194822 bp Length : 1632 bp Strand : - Note : - DNA sequence : ATGCTCGACGGCTGCACCCCCTGGCCCGCGGAGTTCGCCGTCCGCTACCGCGAGGCGGGGTACTGGACCGGGGAGACTTT CAGCGACTTCGTCACCGACCGCACCCGCCGTTTCGCCGACCGCCTCGCCGTGGTCGGCGCGGGCCAGCGCTGGACCTATG CCGAACTGGGGGAGCGCTCCGCGGTCCTCGCCACCGGGCTGGCCCGGCTCGGCATTGCCGCGGGCGACCGCGTCGTCGTC CAACTCCCCAACATCCCAGAACTGTTCGAAGTGGTCTTCGCGCTGTTCCGGCTCGGCGCGCTGCCGGTGTACGCGCTCCC CGCCCACCGGGCCCACGAAATCACCCACCTGTGCACCACGGCCCAGGCGAAAGCACTCATCATCCCTGACCGGCACGCCG GTTTCGACTACCGGACCATGGCCGCGCAGCTGCGCCACGCCGGCACTGCCCCCGAACACGTGGTGGTCGTCGGGGAGCCG GGCGGCTTCACCCCGCTGGCCGAGCTCCGTGCCGACCGGCCCGACCCCGGCGTCTTCACTCGGCCCGAGGCGAGCGACGC GGCCTTCCTCCAACTCTCCGGCGGCACCACCGGGCTGCCCAAGCTCATCCCCCGGACCCACGACGACTACCTGTACTCGG TGCGGGCCAGCGCGGAGATCTGCGCCCTCGGCACCGACACCGTCTACCTTGCGGCGCTGCCCGCCGTGCACAACTTCCCG ATGAGCTCCCCCGGCTTCCTCGGCACCTTTCACGCTGGAGGCACCGTCGTGCTCGCCCCCAACCCTTCCCCTGACACCGC GTTCTCCCTCATCGAAACCGAGCGGGTCACGATCACCGCGGTCGTCCCCCCGATCGCGCTGCAGTGGCTGGACGCGGTGG AGCACGGCTCCCAGAGCCACCGGGACCTCTCTTCACTGCGCGTCCTGCAAGTCGGCGGCGCCAAGTTCGCCCCGGAAGCG GCCCGCCGGGTCCGCCCCGTCCTCGGCTGCACCCTCCAGCAGGTGTTCGGCATGGCCGAAGGGCTGGTCAACTACACCCG GCTCGACGACCCCGACGACATCATCACCACCACCCAGGGGCGGCCGATCAGCCCGGACGACGAGATCCGCATCGTCGACG AGGCCGACCGGCCGGTGCCCGACGGCGAAGTCGGCCACCTGCTCACCCGCGGCCCCTACACCATCCGCGGCTACTACCGG GCCGAGGAGCACAACGCCACCGCGTTCACCCCCGACGGCTTCTACCGCACCGGGGACCTGGTGCGCCGCACCCCCACCGG CCACCTCGTCGTCGAAGGCCGCGCCAAAGACCAGATCAACCGGGGCGGCGAGAAGGTCTCCGCGGAAGAAGTGGAGAACC ACATCCTGGCCCACCCTGCCGTCCACGACGCGGCCGTGGTCGGCATGAGCGACCCCTACCTGGGGGAACGCGTCTGCGCC TACGTCATCGCGCGCACCGAACCACCCAGCCGGAGCGAACTGCTGCGCTTCCTCCGCGAACGGGGCCTGGCCTCCTACAA GATCCCCGACCGGGTCGAATTCGTGGACCGCTTCCCCGTCACCGGCGTCGGAAAGATCTCCCGCAGCGAACTCCGCCGGG AACTCGCACGTAGATTGGACACCACCCGATGA Protein sequence : MLDGCTPWPAEFAVRYREAGYWTGETFSDFVTDRTRRFADRLAVVGAGQRWTYAELGERSAVLATGLARLGIAAGDRVVV QLPNIPELFEVVFALFRLGALPVYALPAHRAHEITHLCTTAQAKALIIPDRHAGFDYRTMAAQLRHAGTAPEHVVVVGEP GGFTPLAELRADRPDPGVFTRPEASDAAFLQLSGGTTGLPKLIPRTHDDYLYSVRASAEICALGTDTVYLAALPAVHNFP MSSPGFLGTFHAGGTVVLAPNPSPDTAFSLIETERVTITAVVPPIALQWLDAVEHGSQSHRDLSSLRVLQVGGAKFAPEA ARRVRPVLGCTLQQVFGMAEGLVNYTRLDDPDDIITTTQGRPISPDDEIRIVDEADRPVPDGEVGHLLTRGPYTIRGYYR AEEHNATAFTPDGFYRTGDLVRRTPTGHLVVEGRAKDQINRGGEKVSAEEVENHILAHPAVHDAAVVGMSDPYLGERVCA YVIARTEPPSRSELLRFLRERGLASYKIPDRVEFVDRFPVTGVGKISRSELRRELARRLDTTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 1e-106 | 50 |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-106 | 50 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 1e-106 | 50 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-106 | 50 |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 1e-106 | 50 |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 1e-106 | 50 |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 8e-107 | 50 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 7e-106 | 49 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 9e-106 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tfu_1871 | YP_289927.1 | 2,3-dihydroxybenzoate-AMP ligase | VFG0168 | Protein | 5e-127 | 54 |
| Tfu_1871 | YP_289927.1 | 2,3-dihydroxybenzoate-AMP ligase | VFG1817 | Protein | 4e-113 | 49 |
| Tfu_1871 | YP_289927.1 | 2,3-dihydroxybenzoate-AMP ligase | VFG0932 | Protein | 6e-110 | 48 |
