Gene Information

Name : Tfu_1662 (Tfu_1662)
Accession : YP_289720.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : ABC-type Mn/Zn transport systems ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1933486 - 1934217 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
GTGACCACCCCGCCCGCACTCGAAGTCCGCGAGGTCACCGTCCGCTACGGCGACGTCCTGGCACTCGACAACGTCACCGT
GGAGATTGGACGCGGCGTCGTGTGCGGCCTGCTCGGCGCCAACGGCTCCGGCAAGTCCACCCTGCTGAAAACCATCGCGG
AACTCGTCACCCCGCAGAGCGGACACGTGCGGATCCACGGCCTACCGCCCGCCCAGGCCCGCAAAAACGGCCTGCTGGGC
TACGTCCCCCAGTCCGAACAGGTGGACTGGGCCTTCCCAGTGCGGGTGATCGACGTGGTGATGATGGGACGCTACGGTCA
CATGGGCCTTACCCGCCGACCCCGCAAGTCCGACCGTGACGCGGTAGCCGAAGCCCTCGAACGCACCGGACTCACCGACC
TGGCCCACCGGCAGATCGGAGCCCTCTCCGGCGGCCAGCGGAAACGCGCGTTCATCGCCCGCGGCATCGCCCAAGGCGCC
ACCGTGTTCCTGCTGGACGAGCCGTTCGCGGGCGTAGACAAGCCCTCAGAACGCACCATCGTTCGCGTGCTGCGGGAGAT
GCGCGACGAAGGAGCCACCCTGCTGGTCTCCACCCACGACCTGGCCGGAGTGGGGGAGCTGTGCGACGAAGCCATCCTGC
TGCACCGGCGCGTCCTGGCCCACGGCAGCCCGGACCGCGTCCTCGTACCCGAGCTGATGCTCCGCGCTTTCGGACTAGAG
GAGCCCGCATGA

Protein sequence : 
MTTPPALEVREVTVRYGDVLALDNVTVEIGRGVVCGLLGANGSGKSTLLKTIAELVTPQSGHVRIHGLPPAQARKNGLLG
YVPQSEQVDWAFPVRVIDVVMMGRYGHMGLTRRPRKSDRDAVAEALERTGLTDLAHRQIGALSGGQRKRAFIARGIAQGA
TVFLLDEPFAGVDKPSERTIVRVLREMRDEGATLLVSTHDLAGVGELCDEAILLHRRVLAHGSPDRVLVPELMLRAFGLE
EPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-51 49
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-51 49
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-51 49
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-51 49
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-51 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_1662 YP_289720.1 ABC-type Mn/Zn transport systems ATPase component BAC0350 Protein 1e-51 49
Tfu_1662 YP_289720.1 ABC-type Mn/Zn transport systems ATPase component BAC0440 Protein 1e-53 49
Tfu_1662 YP_289720.1 ABC-type Mn/Zn transport systems ATPase component BAC0400 Protein 1e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_1662 YP_289720.1 ABC-type Mn/Zn transport systems ATPase component VFG0526 Protein 1e-51 49