Gene Information

Name : Tfu_1494 (Tfu_1494)
Accession : YP_289553.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1726583 - 1727482 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence : 
GTGAACCAGACCGCGACCAACGAAGAACCGTCCCCCGCGGCGGAGCAGGACTTTCCGCGGCGCGGACTGCGCGCCGAACA
CCTCACCCTCGGCTACGGAACCGCCCCCGTGGTGCGCGACCTCACCGTGGACATTGCCGAAGGCGAGTTCGTCGCGATCG
TCGGCCCCAACGGCTGCGGCAAGTCCACCCTGCTCAAAGCCTTGGGTCGGGTCCTGCGTCCGCTGTCCGGCCGAGTACTG
CTGCACGGCCGCGACATCCGCAAACAGCGATCCAAAGACGTGGCCCGGCAACTGGCGCTGCTGCCGCAGAACCCGGCTGT
CCCCGAAGGGATCACCGTGCGCTCCCTCGCCGCGCGAGGCCGCCACCCCTACCACACGCTGCTGCGCCAGTGGAGCCCTG
ACGACGAGGCGGCCATCGACCAGGCCCTGGAACTCACCGGGCTAGCCGCGCACGCCAACAGCCTGGTGGAAACCCTGTCC
GGCGGCCAGCGGCAGCGGGCATGGGTAGCAATGATCCTCGCGCAGAACACCGGGACCATCCTGCTGGACGAACCCACCAC
GTTCCTCGACATCGCCCACCAGTACGACCTGCTGGAACTCTTCGCCGACTTGAACCGGCAGGGCCGCACTGTGGTCGCGG
TGCTCCACGACCTCGCGCAAGCAGCCCGGTTCGCCAGCCGCCTCATCGTCGTCAACGCGGGACGCATCGTCGCCGACGGC
ACCCCTAGTGACGTGCTCACCGCTGACCTCGTGCACCAGGTGTTCGGCCTCGCCTGCGACGTGATCGCCGACCCCCGCAC
GCACACCCCGCTCATCATCCCGCACGAACGGCACCCGGACCTGTGCCGGCAACCAGCCCAGATCAGATCTGACCGTGCCG
CGGTGGACGCTGCCCGGTAA

Protein sequence : 
MNQTATNEEPSPAAEQDFPRRGLRAEHLTLGYGTAPVVRDLTVDIAEGEFVAIVGPNGCGKSTLLKALGRVLRPLSGRVL
LHGRDIRKQRSKDVARQLALLPQNPAVPEGITVRSLAARGRHPYHTLLRQWSPDDEAAIDQALELTGLAAHANSLVETLS
GGQRQRAWVAMILAQNTGTILLDEPTTFLDIAHQYDLLELFADLNRQGRTVVAVLHDLAQAARFASRLIVVNAGRIVADG
TPSDVLTADLVHQVFGLACDVIADPRTHTPLIIPHERHPDLCRQPAQIRSDRAAVDAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-61 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-61 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-61 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-61 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-52 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-56 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_1494 YP_289553.1 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components BAC0164 Protein 3e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_1494 YP_289553.1 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components VFG0925 Protein 2e-69 54
Tfu_1494 YP_289553.1 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components VFG1042 Protein 3e-52 47