Gene Information

Name : Tfu_0100 (Tfu_0100)
Accession : YP_288161.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Unknown
Product : RNA binding S1:resolvase, RNase H-like fold
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 121094 - 123427 bp
Length : 2334 bp
Strand : +
Note : -

DNA sequence :
GTGACGACGTCCATTCACCAGCGGATCGCCGAGGAGCTCGGGGTACGCGAACGGCAGGTACGGGCCGCAGTCGAACTGCT
TGACGACGGCGCAACCGTGCCGTTCATCGCCCGCTACCGCAAAGAAGTCACGGAGATGCTCGACGACGCCCAGTTGCGGG
CGATCGAAGAGCGGCTGCGCTACCTGCGGGAACTGGAGGAACGCCGCACCGTCATCCTGGAGTCGATCAAGGCGCAGGGC
AAACTCACGCCCGAACTCGAAGCCGCGATCATGGCCGCCGACTCCAAGGCACGCCTGGAAGACATCTACCTCCCCTACAA
GCCGAAGCGCCGCACCAAGGCGCAGATCGCGCGCGAAGCCGGACTGGAGCCCTTGGCGGACGCGCTGCTCAACGACCCCT
CCCGCGACCCGCACGACCAGGCCGCCGCCTACGTTGATGCGGACAAGGGGGTCGCGGACACGGCTGCCGCACTGGAAGGC
GCCCGCGCCATCCTGGTGGAACGGTTCACCGAAGACGCCGACCTCATCGGTGAACTGCGGGAACGCATGTGGCAGCGGGG
CCGTCTCGTCTCGCGGGTGCGGGAAGGCAAGGAAGAAGTCGGCGTGAAGTTCGCCGACTACTTCGACTTCGCCGAAGCGT
TCACCACCCTGCCCTCCCACCGGGTCCTGGCTCTGTTCCGCGGTGAGAAGGAAGAAGTCCTCGACCTCACCCTGGAACCG
GAAGAACCGGCAGAAGACCCGAGAGCCCGCAGCAGCTACGAGGTCCGCATCGCCCAGCACTTCGGTATCGCCGACCAGGG
CCGTCCCGGGGACCGCTGGCTGTTGGACACGGTCCGCTGGGCGTGGCGCACCCGCATCCTCGTCCGTCTCGACATCGACC
TGCGCTCCCGCCTCTGGCAGGAAGCCGAAGACGAAGCAGTCCGGGTGTTCGCCGCCAACCTGCGCGACCTGCTGCTGGCC
GCGCCCGCCGGCACCCGGCCCACCATCGGTCTCGACCCGGGCCTGCGCACCGGGGTGAAGGTCGCTGTCGTGGACGGCAC
CGGCAAAGTGGTGGACACCGCGACGATCTACCCGCACGAACCGCAGAAGCGCTGGGACGAGTCCATCGCCGTCCTGGCGG
CGCTCGCCCAGAAGCACCGGGTGGAACTGGTCGCGATCGGTAACGGAACCGCGTCCCGCGAAACCGACCGTCTCGCCGCT
GACCTGATCAAACGCCACCCGGAGCTGAAGCTCACCAAGGTGATGGTGTCGGAGGCCGGGGCGTCGGTGTATTCGGCGTC
CGCCTACGCTTCCCAGGAGCTTCCTGACTTGGACGTGTCGCTGCGCGGCGCTGTCTCTATTGCACGACGACTCCAGGACC
CGCTCGCCGAGCTGGTTAAAATCGACCCCAAGTCAATCGGGGTCGGCCAATACCAGCACGACGTGTCCGAGGTGAAACTG
TCCCGCTCCTTGGACGCGGTCGTGGAAGACTGCGTGAACGCGGTCGGCGTGGACGTGAACACCGCGTCGGTACCGCTGCT
CAGCCGCGTTTCCGGTATCACGGCGAGCCTGGCCCAGAACATCGTCGCCTACCGTGACGCCAACGGGCCGTTCCGTACCC
GTGCCCAACTGCGGGAAGTGCCGCGGTTGGGACCGAAAGCGTTCGAACAGTGCGCGGGTTTCCTGCGGATTCCTGACGGG
GACGACCCGTTGGACTCTTCAAGCGTCCACCCGGAGGCGTATCCGGTGGTGCGGCGCATCCTCGAGGCGACCGGCCGGGA
TATCCGGGCGCTCATCGGCGACACGGACACGCTGCGCTCGCTACGCCCCGACGACTTCGTGGACGAGCGGTTCGGTCTGC
CCACGGTGACCGACATCCTCGCGGAGTTGGAGAAACCGGGCCGGGACCCGCGCCCCGAGTTCCAGACCGCAGCATTCCGG
GACGGGGTGGAGGACATCACCGACCTGGAACCGGGCATGGTGCTGGAGGGCGTGGTCACCAACGTGGCGGCGTTCGGCGC
GTTCGTGGACGTGGGAGTGCACCACGACGGCCTGGTGCACGTCTCAGCGATGTCGAAGAGTTTCGTCAAAGACCCGCGGG
ACGTGGTCAAGCCCGGCGACATCGTGCGCGTCAAAGTGCTGGACGTGGATGTGCGTCGCAAGCGGATCTCGCTGACTCTC
CGCTTGGACGATGAAGTGGACCAGCGCAGTGGGGAGAACAACCGCTCCGGCGGGGAGCGCCGGGAGCGGGGTGCGCCGCG
GCGCGGGGACCAGCGGCGGCAGCGCGGCGGCCGCGGCGAGCAGCAGCCCATGGGGGCGATGGCGGAAGCGCTGCGCCGCG
CAGGCCTGGTGTAG

Protein sequence :
MTTSIHQRIAEELGVRERQVRAAVELLDDGATVPFIARYRKEVTEMLDDAQLRAIEERLRYLRELEERRTVILESIKAQG
KLTPELEAAIMAADSKARLEDIYLPYKPKRRTKAQIAREAGLEPLADALLNDPSRDPHDQAAAYVDADKGVADTAAALEG
ARAILVERFTEDADLIGELRERMWQRGRLVSRVREGKEEVGVKFADYFDFAEAFTTLPSHRVLALFRGEKEEVLDLTLEP
EEPAEDPRARSSYEVRIAQHFGIADQGRPGDRWLLDTVRWAWRTRILVRLDIDLRSRLWQEAEDEAVRVFAANLRDLLLA
APAGTRPTIGLDPGLRTGVKVAVVDGTGKVVDTATIYPHEPQKRWDESIAVLAALAQKHRVELVAIGNGTASRETDRLAA
DLIKRHPELKLTKVMVSEAGASVYSASAYASQELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSEVKL
SRSLDAVVEDCVNAVGVDVNTASVPLLSRVSGITASLAQNIVAYRDANGPFRTRAQLREVPRLGPKAFEQCAGFLRIPDG
DDPLDSSSVHPEAYPVVRRILEATGRDIRALIGDTDTLRSLRPDDFVDERFGLPTVTDILAELEKPGRDPRPEFQTAAFR
DGVEDITDLEPGMVLEGVVTNVAAFGAFVDVGVHHDGLVHVSAMSKSFVKDPRDVVKPGDIVRVKVLDVDVRRKRISLTL
RLDDEVDQRSGENNRSGGERRERGAPRRGDQRRQRGGRGEQQPMGAMAEALRRAGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61