Gene Information

Name : Tfu_0988 (Tfu_0988)
Accession : YP_289049.1
Strain : Thermobifida fusca YX
Genome accession: NC_007333
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1159703 - 1161127 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
GTGTTCAGCAACGCTGACGAGGCTCTTGCCTATATCCGCACCGAAGGCGTTCAGTTCGTGGACGTCCGGTTCACCGACCT
GTTCGGTGGTGTCCACCACGTGACGCTTCCGGCCGAGAAGGTTGACGAGGACTTCCTCACGAACGGGCAGATGTTCGACG
GCTCGTCGATCCGCGGCTTCCAGGCGATCCACGAGTCCGACATGCTGCTCCTGCCGGACCTGAGCACCGCTGTCCTCGAC
CCCTTCCGCGAATACAAGACGCTGAACATCACGTTCTTCGTGCACGACCCGCTGACCCGCGAGTCCTACAGCCGCGACCC
GCGGAACGTGGCCCGCAAGGCCGAGGCGTATCTGAAGAGCACGGGGATCGCGGACACCGCGTACTTCGGCCCGGAAGCCG
AGTTCTACATTTTCGACGACGTCCAGTTCGCGACCGCGCCGAACACCGGTTTCTACGCGATCGACTCGGTGGAGGGCGCG
TGGAACACCGGCAGCAAGCGGGAGGGCGGCAACCTCGGCTACCGGCCGCGCTACAAGGGTGGCTACTTCCCGGTGGAGCC
GAGCGACCACTACAGCGACCTGCGGTCCCGCATGGTGCGCACCATGATCGAGGTGGGGCTGCCGGTGGAGCTGCACCACC
ACGAGGTGGGCACGGCGGGCCAGTCGGAGATCGGCATCAAGTTCGGCACGCTGCTGCAGCAGGCTGACCGGGTCCAGTTG
TACAAGTACATCGTCAAGAACGTGGCGAACGCGGCGGGCAAGACGGTGACGTTCATGCCGAAGCCGCTGTTCGGCGACAA
CGGCTCGGGGATGCACTGCCACCAGAGCCTGTGGAAGGACGGCGCTCCCCTGTTCTTCGACGAGAACGGGTACGCGCAGT
TGTCCGACATCGCCCGCTACTACATCGGCGGCCTGTTGAAGCACGCCCCGTCGCTGCTGGCGTTCACCAACCCGACGATC
AACTCCTACCACCGCCTGGTGCCCGGCTACGAGGCGCCGATCAACCTGGTGTACTCGCAGCGGAACCGTTCCGCGTGCAT
CCGTATCCCGCTGACCGGGTCTGACCCGAAGGCGAAGCGGCTGGAGTTCCGGGTGCCGGACCCGTCGGCCAACCCGTACC
TGGCGTTCTCCGCGATGCTGATGGCGGGGATCGACGGGATCCAGAACAAGATCGAGCCGCCGGAGCCGCTGGACAAGGAC
CTCTACGAGCTGCCGCCGGAGGAGGCCGCGGAGATCGAGAAGGTGCCGGCGTCGCTGGAGGAGGCGCTGGACCACTTGGA
GGAGGACCACGAGTACCTGGTGGAGGGCGGTGTCTTCACCGAGGACTTGATCGAGACGTACATCAACTACAAGCGCACGG
TGGAGATCGACTCGGTCCGGCTGCGTCCGCACCCGCGCGAGTTCGAGCTCTACTACGACGTCTGA

Protein sequence :
MFSNADEALAYIRTEGVQFVDVRFTDLFGGVHHVTLPAEKVDEDFLTNGQMFDGSSIRGFQAIHESDMLLLPDLSTAVLD
PFREYKTLNITFFVHDPLTRESYSRDPRNVARKAEAYLKSTGIADTAYFGPEAEFYIFDDVQFATAPNTGFYAIDSVEGA
WNTGSKREGGNLGYRPRYKGGYFPVEPSDHYSDLRSRMVRTMIEVGLPVELHHHEVGTAGQSEIGIKFGTLLQQADRVQL
YKYIVKNVANAAGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLFFDENGYAQLSDIARYYIGGLLKHAPSLLAFTNPTI
NSYHRLVPGYEAPINLVYSQRNRSACIRIPLTGSDPKAKRLEFRVPDPSANPYLAFSAMLMAGIDGIQNKIEPPEPLDKD
LYELPPEEAAEIEKVPASLEEALDHLEEDHEYLVEGGVFTEDLIETYINYKRTVEIDSVRLRPHPREFELYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-88 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tfu_0988 YP_289049.1 L-glutamine synthetase VFG1399 Protein 1e-151 68