Gene Information

Name : GBAA_pXO1_0060 (GBAA_pXO1_0060)
Accession : YP_016391.2
Strain :
Genome accession: NC_007322
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 51037 - 51234 bp
Length : 198 bp
Strand : +
Note : identified by match to PFAM protein family HMM PF01381

DNA sequence :
ATGACTGTAAAAAATAAAATTAAGGAACTACGAGTACAACATGAAATTACACAAGTACAGATGGCAAAGGACTTACAAGT
TACAAGACAAACGATTGTAGCCATTGAAAACAATCACTATAATCCAAGTTTAGAATTAGCATTGAAAATAGCTCATTACT
TTAATCTAAAAATGGAGGACATTTTTACACTTGAATAA

Protein sequence :
MTVKNKIKELRVQHEITQVQMAKDLQVTRQTIVAIENNHYNPSLELALKIAHYFNLKMEDIFTLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-09 51
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-09 51
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-10 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GBAA_pXO1_0060 YP_016391.2 DNA-binding protein VFG2168 Protein 1e-09 51
GBAA_pXO1_0060 YP_016391.2 DNA-binding protein VFG2175 Protein 1e-09 51