Gene Information

Name : Daro_0662 (Daro_0662)
Accession : YP_283888.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 728163 - 729518 bp
Length : 1356 bp
Strand : +
Note : -

DNA sequence : 
GTGTCAGTTGTCAGAACCGAACGGCGCCCGCGCGGCGAATTAAGCCGGGTTCTCGTCGTTGATGACGAGCCCGATATCCG
TGAACTGATCGATTTAACCTTGGCGCGCATGGGCTTGGCAACCGAGTGTGTCGGGTCGGTTGCTGAAGCGAAGGCCGCGC
TTGAGGCCGGTGATTTCCAGCTTTGTCTGACTGATATGCGTTTGCCGGATGGCGATGGGCTGGAAATCGTTCGTTCGATC
ACCGAGCATTATCCCCAAACGCCGGTCGCCGTCATTACCGCTTATGGCAGCGCTGAGAATGCAGTAGCTGCCTTGAAGGC
GGGGGCTTTCGACTATCTGGCCAAGCCAGTTGGGCTTGAACAACTGCGTGCCTTGATCAAGTCGGCCCTGCGTTTGCCAG
GGGGCGGGCAGGACAACGAGAATCCCCTGCAGTCCTTGATCGGCGACTCCCCGAGCATGCAGCAGGTACGGGCGATGATC
GAGAAATTGGCGCGCAGCCAGGCGCCGATCTACATTTCCGGTGAATCCGGTAGCGGCAAGGAACTGGGTGCCCGATTGAT
CCATAGTCGTAGCGCCCGGGCAGCCGGACCCTTTGTGCCGGTCAATTGCGGGGCGATTCCAGAAAACCTGATGGAGAGCG
AATTCTTCGGTTACCGGAAAGGCGCATTTACCGGCGCCGATAGTGAGCGCGAGGGGTTTTTCCAGGCGGCCAACGGAGGG
ACACTGTTCCTTGATGAAGTGGCTGATCTGCCGCTGGCCATGCAGGTCAAGCTATTGCGGGCGATCCAGGAAAAGCGGGT
GCGCAAGGTCGGCAGCGTGGCCGAAGAGCCGGTCGATGTCCGGATCATCTGTGCGACTCACCGTAACCTGCGTGATCTGG
TGGACAAAGGTGGCTTCCGGCAGGACTTGTACTACCGGCTGAATGTGATTGAACTTCGGATGCCGCCGTTGCGTGAACGT
CTTGAGGACATTGCACCGCTGGTTGATGCCATCTTGCGGCGCGTTTTCGGGGACACCACGCCGAAACTTTCAAGTGGTGC
CCTGAAGGCGCTGGAGTTCTACTCCTTTCCGGGGAACGTTCGCGAACTGGAGAACATTCTCGAGCGGGCGACGGCGCTTT
GTTCGGGCGATACGATCGAAGTGGACGATCTGCATCTCGGCCCCGAGGACATGCCGGGCGGCGAAGCGCCGGGACGTGGC
AGTGAAACTCTGGATGAATATCTGAATCGTCTTGAACGTCAGGCTATCCTGGAGGCTTTGCAGAAGGCAGAAGGGAACCG
TACAGCGGCGGCGCGCCTGCTCGGCGTGACCTTCCGCTCGATGCGCTACCGGCTTGAGCGTTTGGGCATCGAGTGA

Protein sequence : 
MSVVRTERRPRGELSRVLVVDDEPDIRELIDLTLARMGLATECVGSVAEAKAALEAGDFQLCLTDMRLPDGDGLEIVRSI
TEHYPQTPVAVITAYGSAENAVAALKAGAFDYLAKPVGLEQLRALIKSALRLPGGGQDNENPLQSLIGDSPSMQQVRAMI
EKLARSQAPIYISGESGSGKELGARLIHSRSARAAGPFVPVNCGAIPENLMESEFFGYRKGAFTGADSEREGFFQAANGG
TLFLDEVADLPLAMQVKLLRAIQEKRVRKVGSVAEEPVDVRIICATHRNLRDLVDKGGFRQDLYYRLNVIELRMPPLRER
LEDIAPLVDAILRRVFGDTTPKLSSGALKALEFYSFPGNVRELENILERATALCSGDTIEVDDLHLGPEDMPGGEAPGRG
SETLDEYLNRLERQAILEALQKAEGNRTAAARLLGVTFRSMRYRLERLGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-98 46
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-98 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_0662 YP_283888.1 Fis family transcriptional regulator BAC0467 Protein 9e-76 45
Daro_0662 YP_283888.1 Fis family transcriptional regulator BAC0089 Protein 7e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_0662 YP_283888.1 Fis family transcriptional regulator VFG1214 Protein 1e-127 60