Gene Information

Name : Daro_3959 (Daro_3959)
Accession : YP_287156.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 4255760 - 4256920 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCAGAGACCCCGAATCTATTACACGGATAGCCAGAAGGCGCTGATGTGGGAACGCTGGCGCAAGGGCGATTCGCT
TCAAAAAATCGCCCAGTTATTTGATCGAAACCACTCATCGGTTCAGGGAGTCCTGGCCGAGACAGGTGGCATTCCACCGG
CACCCCGATGTCGCTCGAAACGTTCGCTCACGCTTGCTGAACGGGAGGAGATTTCCCGAGGCTTGGTGGCGGGGCTTTCA
ATCCGTGTGCTTGCTGCGCAATTGGGACGAGCACCGTCCACCGTCAGTCGTGAAGTCAAACGTAATGGTGGCCGTGAATG
CTACCGAGCAACTCAGGCCGACCAGGCAACCTGGACTCGGGCGCTTCGCCCCAAGCCTTGCAAACTGACTGAGAACCCTG
GGCTGGCGCATATAGTGGCGAACAAGCTGCAGTCGCTGTGGTCACCAGAACAGATTGCTGGCTGGCTCAAGCGGACCAAC
CCAGACAATGCGAGCAATCAGGTGTCACACGAGACAATCTATCGCACCCTCTATATTCAAACCCGAGGCGCTCTGAAGAA
AGAGTTGTTGGCGTATTTGCGGCGGACGCGAGCCATGCGCCGCTCTCGCCATCACACACAAAAGACTGCCGATCACGGCC
GAATCGTCGATGCTGTGTCAATCAGCGAACGGCCGGCCACGGCTGATGATCGAGCGGTGCCGGGGCACTGGGAAGGGGAT
CTGCTGTGCGGCAGCAAGAACAGTCAGATTGCAACGCTCGTCGAACGTCAGTCGCGCTACCTGATGCTGGTCAAGCTCTC
CGGCAAAGACACCGGGACCGTCACCAACGCCCTGATCAAAAACGCTCGTAAGTTGCCGCAAGACCTTTACAAATCGCTCA
CCTGGGACCGGGGCAAGGAAATGGCTGGCCATAAGCGATTCACGCTGGCGACGGATATTCAAGTCTATTTCTGCGATCCC
CATCACCCTTGGCAACGTGGAACGAATGAGAATACAAATGGCCTGTTGCGCCAGTATTTCCCAAAGGGAATTGACCTGTC
CCCCTATTCGCAAGCGAAGCTGAGTGCCATTGCCCGAAAACTGAATGAGCGCCCACGGAAAACACTAAACTACGAAACAC
CGGCACAACGTTTTTACCAAACCGTTGCATCCACCGGTTGA

Protein sequence :
MKQRPRIYYTDSQKALMWERWRKGDSLQKIAQLFDRNHSSVQGVLAETGGIPPAPRCRSKRSLTLAEREEISRGLVAGLS
IRVLAAQLGRAPSTVSREVKRNGGRECYRATQADQATWTRALRPKPCKLTENPGLAHIVANKLQSLWSPEQIAGWLKRTN
PDNASNQVSHETIYRTLYIQTRGALKKELLAYLRRTRAMRRSRHHTQKTADHGRIVDAVSISERPATADDRAVPGHWEGD
LLCGSKNSQIATLVERQSRYLMLVKLSGKDTGTVTNALIKNARKLPQDLYKSLTWDRGKEMAGHKRFTLATDIQVYFCDP
HHPWQRGTNENTNGLLRQYFPKGIDLSPYSQAKLSAIARKLNERPRKTLNYETPAQRFYQTVASTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39292.1 - Not tested LPA Protein 1e-82 50
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 7e-56 43
DIP0764 NP_939135.1 transposase Not tested Not named Protein 1e-55 43
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 6e-56 43