Gene Information

Name : Daro_3917 (Daro_3917)
Accession : YP_287115.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Resistance
Product : ABC transporter related
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4211340 - 4212038 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
GTGAGTGCGCCCTTGATTGAATTGCGCGGCATCACCAAGACCTACGGTCAGGGGCAGGCGGCGTTTCAGGCCCTGCGTGG
CGTTGATCTGACCATCGAAGCCGGTGAATTCGTGGCGGTGATGGGGCCGAGCGGTTCCGGCAAATCGACGGCGATGAACC
TGCTCGGCTGCCTCGATACGCCGACCTCGGGCGAATACCGTTTTCAGGGCATCAACGTCGAGCAACTCGACCGCAACCAG
CGGGCCTTGCTGCGTCGGCAATGTCTTGGCTTCGTTTTTCAGGGCTTCAATTTGCTGGCGCGCACCTCAGCGCAGGAGAA
CGTCGAGCTGCCTCTGCTCTATCGCGGCGAACCGGCCGCAGTGCGCCACGCTGCGGCGCGGGCGGCTCTCGCCAAAGTCG
GCCTCGACGGCTGGGAAACGCACACCCCGGCCGAGCTTTCCGGCGGTCAGCAGCAGCGTGTCGCGATTGCCCGGGCCATT
GTCACCAACCCGCTGGTGCTGCTCGCCGACGAGCCGACCGGCAACCTCGACAGCAAGCGCAGCCACGAGATCATGGAGCT
GCTCGGGCGGCTGAACAGCGAACAACGCATCACCATCATCATGGTCACCCACGAGCCGGATATGGCGCACTACGCGCGGC
GCATCGTGCATTTTGTCGACGGGTTGGTGGACAGCGACAGCGCGACGGAGGCAGCATGA

Protein sequence :
MSAPLIELRGITKTYGQGQAAFQALRGVDLTIEAGEFVAVMGPSGSGKSTAMNLLGCLDTPTSGEYRFQGINVEQLDRNQ
RALLRRQCLGFVFQGFNLLARTSAQENVELPLLYRGEPAAVRHAAARAALAKVGLDGWETHTPAELSGGQQQRVAIARAI
VTNPLVLLADEPTGNLDSKRSHEIMELLGRLNSEQRITIIMVTHEPDMAHYARRIVHFVDGLVDSDSATEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-30 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_3917 YP_287115.1 ABC transporter related NC_012469.1.7686878. Protein 1e-50 54
Daro_3917 YP_287115.1 ABC transporter related NC_008702.1.4606598. Protein 1e-43 52
Daro_3917 YP_287115.1 ABC transporter related CP001581.1.gene798.p Protein 1e-35 42
Daro_3917 YP_287115.1 ABC transporter related CP001581.1.gene598.p Protein 6e-35 41