Gene Information

Name : hemC (Daro_3674)
Accession : YP_286873.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3948259 - 3949194 bp
Length : 936 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCCCGTCCTTCGAAGATTGTCATTGCCTCCCGCGAATCCCGTCTGGCCATGTGGCAGGCGGTGCACGTTAGAGATCG
CTTATCGAGTTTAAATCCCGGGGCGGAGGTTGTCATTCTCGGCATGACGACCAAGGGCGACCAGATCCTCGATCGCCCGC
TGGCCGAGATCGGCGGCAAGGGGCTGTTCATCAAGGAACTGGAAGTCGCCATGCAGGAAGGCAAGGCCCACCTCGCCGTG
CATTCGATGAAGGATGTGCCGATGGTGATGCCGGAAGGCTTCGTGCTGGCCGCCATCTCGGCCCGCGAGAATCCGCGCGA
TGCCTTCGTTTCAAACAAGTACAACGGGCTGGATGACCTGCCGGCCGGCGCCATCGTCGGTACCTCCAGCCTGCGCCGCG
AATCCATCCTGCGTGCCAAGTATCCACAGCTGGTCATCAAGAGCCTGCGCGGCAACCTCGATACCCGTTTGAAGAAGCTC
GACGCCGGCGAATACGACGCGATCATCCTGGCTGCCGCCGGCCTGATCCGCCTCGGCATGGAAAATCGCATCAAATCCGT
GTTGACCGCCGAACAGTCGTTGCCGGCTCCCGGTCAGGGCGCGCTGGGCATCGAGCTGATCGACGGCGCCGCCGACATGG
CCGACGTTGTCGCACCGCTCAACGACCCGGAAACGGCCCACTGCGTCAAAGCCGAACGCGCCTTCTCGCGCGCCTTGGGC
GGTAGCTGCCAGGTGCCGCTCGGCGGCTACGCGATCATCGACAACGGCCAGCTCTGGCTGCGCGGTTTCGTCGCGACGGC
TGACGGCCAGGAAGTGGTCAGTGCCGAATTGCGCGGCAACCCGGCCGACGACGAAGCACTCGGCCTGCAATTGGCGGCCG
AACTGCGCGCCAAGGGCGCCGACGCGATCCTGGAAAAGCTCGCCCACTGCAAATGA

Protein sequence :
MSRPSKIVIASRESRLAMWQAVHVRDRLSSLNPGAEVVILGMTTKGDQILDRPLAEIGGKGLFIKELEVAMQEGKAHLAV
HSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLDDLPAGAIVGTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKL
DAGEYDAIILAAAGLIRLGMENRIKSVLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRALG
GSCQVPLGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAKGADAILEKLAHCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-65 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-65 54