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Name : Daro_3223 (Daro_3223) Accession : YP_286423.1 Strain : Dechloromonas aromatica RCB Genome accession: NC_007298 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3474282 - 3475976 bp Length : 1695 bp Strand : + Note : - DNA sequence : ATGAACACACTTGTCGATCCCGGCCTGCTTGAACACGACACCCTGCTGGATGCGGCACGTCAGCTAACGCGGCTCAGCGG CATGTCGGCCGCCATCATCGGTTTGCAGTCGGCGCACGGCATCGACGAACAGAAGGCCGCCGACATCACCGCTGCCGCAT TCGGCCTGACGAGCATCCGCCTCAGCGAGTTGCCGGAACACGCCCTGGCCCTGTCGCTGGCCTCCTTCGCTGAATACCTC CGGCGCCAGGTGCTGGTCATCGACACCGCAGCCGCCTGTCTGGTCGTCGCCCCCAATCCGCTTGATGCCGGCCTGCGCGA CTGGCTGGAGGGCCTGCTGCCACTGAGCCGGCGCATCGACTGGCGCCTGGCGCCGGCTTCGGTGATCGCCGCCTATCTGG CTCGCGAAGAGTCTCGCGTCCGGGCGCTGGATGGCGACTTCAATGGCGACAAATCTCAGGTCAGCACGGGCGAAAACGCT GAAGACCTGTCGCTGCAGGGCATTTCGGAAGAAGGCAGCAACATCGTGCGGCTGGTCCGCTCGACCCTGCATGACGGCCT GAAAGCCGGCGCCAGCGACATCCACATCGAAGCCAACAACCGCGGGCTGGCGATCAAGTACCGGATCGACGGCGTGCTCA ATTTTGCCGGCGCCATCGACGGCAGCGACACGGCCGAACAGATGATCTCGCGCATAAAGGTGCTGTCCGAACTCGACATT GCCGAGCGCCGGGTGCCGCAGGACGGCCGCTTCAAGGTCAACTGGCAGGGCCGAGAAATCGACATCCGGGTCTCGATCAT GCCCAGCATCTGGGGCGAGGATGCCGTGCTGCGCGTCCTCGACAAGCAGGCCCTGAGTGACCATCTCGACGGCCTGCGCC TCGACGTGATGGGCTTCGATGCCGACACCATGTACCGTATCCGCCGCCTGTCGGCCGAACCCTACGGCATGCTGCTGGTC ACCGGCCCGACCGGCAGCGGCAAGACGACGACGCTCTATGCGGCGCTATCGGAAATCAATCGCGGCGAGGACAAGATCGT CACCATCGAGGACCCGGTCGAATACCAGTTGTCCGGCGTGCTGCAGATTCCGGTCAATGAAAAGAAGGGGCTGAGTTTCG CCCGCGGCCTGCGCTCCATCCTGCGCCACGACCCGGACAAGATCATGGTCGGCGAAATCCGCGATTCGGAAACCGCGCAG ATTGCGGTGCAGGCGGCGCTGACCGGCCACCTCGTGTTCACCACGGTGCATGCCAACAACGTCTTCGACGTAATCGGCCG CTTCCTGCACATGGAAGTCGATCCCTACAACCTCGTTTCGGCGCTGAATGGCGTCGTTGCCCAGCGCCTGATCCGCACGC TGTGCCCGGCCTGCGCCAGCCCGACGACGCCGATGCCCGAAGCGCTGGCCAATGCCGAGATCGACCCGCTGGCGGCCGCC GACTGGCAGTTCCGCCAGGCCGTCGGTTGCGGCAGCTGTCGCGGCACCGGCTATCGCGGCCGGCGGGCGATTGCCGAACT GCTGGCCCTCGACGATGAACTTCGCGAACTGATCCTGGCCCGCGCCCCGATCCGCCAACTGAAGGACGCCGCCCGGCGCG GCGGCACGCGCTCGCTGCGCGAATCGGCGCTCGATCTGGTCAAGGTCGGCATCACCAGTCTGGAGGAGGCCAACCGTGTC ACTTTCGTGGCTTGA Protein sequence : MNTLVDPGLLEHDTLLDAARQLTRLSGMSAAIIGLQSAHGIDEQKAADITAAAFGLTSIRLSELPEHALALSLASFAEYL RRQVLVIDTAAACLVVAPNPLDAGLRDWLEGLLPLSRRIDWRLAPASVIAAYLAREESRVRALDGDFNGDKSQVSTGENA EDLSLQGISEEGSNIVRLVRSTLHDGLKAGASDIHIEANNRGLAIKYRIDGVLNFAGAIDGSDTAEQMISRIKVLSELDI AERRVPQDGRFKVNWQGREIDIRVSIMPSIWGEDAVLRVLDKQALSDHLDGLRLDVMGFDADTMYRIRRLSAEPYGMLLV TGPTGSGKTTTLYAALSEINRGEDKIVTIEDPVEYQLSGVLQIPVNEKKGLSFARGLRSILRHDPDKIMVGEIRDSETAQ IAVQAALTGHLVFTTVHANNVFDVIGRFLHMEVDPYNLVSALNGVVAQRLIRTLCPACASPTTPMPEALANAEIDPLAAA DWQFRQAVGCGSCRGTGYRGRRAIAELLALDDELRELILARAPIRQLKDAARRGGTRSLRESALDLVKVGITSLEEANRV TFVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-74 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-74 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daro_3223 | YP_286423.1 | type II secretion system protein E | VFG0182 | Protein | 2e-72 | 47 |
| Daro_3223 | YP_286423.1 | type II secretion system protein E | VFG2048 | Protein | 2e-74 | 46 |
| Daro_3223 | YP_286423.1 | type II secretion system protein E | VFG0233 | Protein | 2e-68 | 42 |
| Daro_3223 | YP_286423.1 | type II secretion system protein E | VFG1880 | Protein | 2e-63 | 41 |
