Gene Information

Name : Daro_3108 (Daro_3108)
Accession : YP_286308.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3351354 - 3351962 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAATCCGACGCAAACCATTTTTGTCGTCGACGACGACGAGGCCATGCGCGACTCGATGACCTGGCTACTCGAAGG
CGAAGGCTATCGCGTCGCCTGCTTCGACTCGGCAGAGAACTTCCTGAAAGCCCGGCGCGATGATATGCGCGGTTGCCTGG
TGCTTGATGTCCGGATGCCGGAGATGAGCGGCCTGGAATTACAGGAAAAGCTGGACGCCCTTGGCTCGCAGCTCCCGGTC
ATCTTCGTCACTGGCCACGGCGATGTGCCGATGGCCGTTTCAGCCCTGCAACGGGGCGCCTGCGATTTCATCGAAAAGCC
GTTCCACAACGAAGACCTGCTGTCACGCATCCAGCGTGCACTTGAACTGGACAATCAGCTATCAGCCCGCCGCCAGCGCG
ATGGCGTCATTTCGCATCGACTGGATCAGCTCACTCAACGCGAGCGAGAGGTCATGCAACTGGTCGTCGCCGGCAAGCTG
AACAAACAGATCGCCGACGAGCTGAACATCAGCATGAAAACCGTCGAAGCGCATCGGGCCAGAGTCATGGAAAAAATGGG
CGTCCGAACCCTGGCCGAACTGGTCAAGGCGGTCATGATGGTGAATTGA

Protein sequence : 
MSNPTQTIFVVDDDEAMRDSMTWLLEGEGYRVACFDSAENFLKARRDDMRGCLVLDVRMPEMSGLELQEKLDALGSQLPV
IFVTGHGDVPMAVSALQRGACDFIEKPFHNEDLLSRIQRALELDNQLSARRQRDGVISHRLDQLTQREREVMQLVVAGKL
NKQIADELNISMKTVEAHRARVMEKMGVRTLAELVKAVMMVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 8e-31 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 8e-31 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 8e-31 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-31 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_3108 YP_286308.1 LuxR family transcriptional regulator VFG0488 Protein 6e-32 43