Gene Information

Name : lspA (Daro_3045)
Accession : YP_286245.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 3287977 - 3288456 bp
Length : 480 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
GTGCCTAAGGCAGCACACTGGTATGGCCTTGCCGCTCTGGTCATCATTCTCGACCAGATCAGCAAGTGGGTGGTGCTGGA
GAACATTCGTTTTGGCGAGACGATCTATGTCGCGCCTTTCTGGAACTGGGTGCTGACCTTCAATCCCGGTGCCGCCTTCA
GCTTCCTGGCCGATCAGCCGGGCTGGCAGCGCTGGTTTTTCGCGTTGCTGGCGCTTGCAGTTTCCGGCTGGATCGCCTTC
ATGCTCCGCCAGCATCCACAACAAAAACTGCTCTCGCTGGCCCTGGCACTGGTCATGGGCGGCGCGCTGGGCAACGTGAT
CGACCGCATCCGTTTCGGCGCAGTTGTCGATTTCATTCAATGGCATGCCGCCGGCTACTACTGGCCGGCTTTCAACGTCG
CCGATTCGGCAATCACGGTCGGCGCGGTCCTGCTCGTTCTGGAGCAGTTGACCTCGGCTAAACAGAAAGAGAATTCCTGA

Protein sequence :
MPKAAHWYGLAALVIILDQISKWVVLENIRFGETIYVAPFWNWVLTFNPGAAFSFLADQPGWQRWFFALLALAVSGWIAF
MLRQHPQQKLLSLALALVMGGALGNVIDRIRFGAVVDFIQWHAAGYYWPAFNVADSAITVGAVLLVLEQLTSAKQKENS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 6e-17 44
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 2e-10 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 7e-13 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 7e-13 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 7e-13 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-12 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-12 42
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 2e-10 42
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 3e-10 42