Gene Information

Name : Daro_2727 (Daro_2727)
Accession : YP_285927.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2920219 - 2922810 bp
Length : 2592 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCTTGATAAGTTTACGACCAAATTTCAGCAGTCTTTAGCCGATGCCCAAAGTCTGGCCATTGGCGGCGACCAGCA
ATTCATCGAACCGCAGCACCTGCTGCTCGCCCTGATCAATCAGGATGACGGCGGAACGACCTCGTTGCTGTCGCGCGCCG
GTGTTAACGTACCCGGCCTGAAGCGCGATCTTGAACAGGCGCTGACCCGTTTGCCACAAGTCCAGGGCCACGGCGGTGAT
GTCTCCATTGGCCGCGACCTGAACAACCTGCTCAATCTGACCGACAAGGAAGCTCAGAAGCGTGGCGACCAGTTCATCGC
CAGCGAGATGTTCCTGCTCGCCTTGTGCGACGACAAGAACGAAACCGGCCGCATTGCCAAGCAGCATGGCTTTTCCCGCA
AGTCCATCGAAGCGGCGATCATGGCCGTGCGTGGTGGACAGGGGGTCGATTCTCAGGAAGCTGAAGGTCAGCGCGAATCG
CTGAAGAAATACTGCATCGATCTGACCGAACGCGCCGCTCAGGGGAAACTCGACCCGGTCATCGGTCGCGACGATGAAAT
CCGCCGCGCTATCCAGATCCTGCAGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGTGTTGGCAAGACGG
CCATCGTCGAGGGGTTGGCCCAGCGTATCGTCAATGAAGAAGTGCCGGAAACCCTGAAGGGCAAGAAGGTGCTGGTCCTC
GATATGGCCGGCCTGCTGGCCGGGGCCAAGTATCGCGGTGAATTCGAGGAGCGCCTGAAAGCCGTGCTCAAGGAAGTGGC
GCAGGACGAAGGTCGCATCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGTAAGGCTGAAGGTGCCATCG
ACGCGGGCAACATGCTGAAACCAGCATTGGCGCGTGGCGAACTGCACTGCATCGGTGCGACGACACTGAACGAATACCGC
AAATATATCGAGAAGGACGCCGCGCTGGAGCGTCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGTCGAATCGACCAT
CGCCATCCTGCGCGGCCTGCAGGAAAAGTACGAGCTGCACCACGGCGTCGATATCACCGACCCGGCCATCGTTGCTGCCG
CCGAGTTGTCGCACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGACGAAGCTGCGGCCCGC
ATCAAGATGGAAATCGATTCCAAGCCGGAAGTGATGGACAAGCTGGATCGTCGCATCATCCAGCTCAAGATCGAGCGCGA
GGCGGTCAAGAAAGAAAAGGACGAGGCTTCCAAGAAGCGATTTGGCCTGATCGAAGAGGAAATCGCCAAGCTGACCAAGG
AATACTCCGACCTGGAAGAGGTTTGGAAAGCCGAGAAGTCCGCTGTGCTTGGTTCTGCCCAGATCAAGGAAGAAATCGAT
CATCTGAAGGCTGACATCGCCCGCCTGCAGCGCGAAGGCAAACTAGGCGAAGTGGCCGAACTGCAATACGGCAAGCTGCC
ACAGCTGGAAGCGCAGTTGAAGGCTGCCGAGAAAGCTGGCGAGGGCGAAGGTCGAAAGAACAAGCTGCTGCGCACGCAGG
TTGGCGCCGAGGAAATCGCCGAGGTGGTCTCCCGTGCCACGGGTATTCCGGTCAGCAAGATGATGCAGGGCGAGCGCGAG
AAGCTGCTCAACATGGAAGACCGGCTGCACAAGCGCGTCGTCGGTCAGGATGAAGCGGTGCGCCTGGTGGGCGACGCCAT
TCGTCGTTCGCGGGCCGGTCTGTCCGATCCCAACCGTCCGTACGGATCCTTCCTGTTCCTTGGCCCGACCGGTGTCGGCA
AAACCGAGCTGTGCAAGGCGCTGGCCGAGTTCATGTTCGACGCCGAAGACCACCTGATCCGCATCGACATGAGCGAGTTC
ATGGAGAAGCACTCGGTCGCCCGCCTGATCGGCGCGCCGCCGGGCTACGTTGGCTACGAAGAGGGCGGTTACCTGACCGA
AGCCGTGCGTCGCAAGCCGTACAGCGTGATCCTGCTCGATGAGGTCGAGAAGGCCCACCCGGATGTCTTCAACGTGCTGC
TGCAGGTGCTCGACGATGGCCGGATGACCGATGGCCAGGGGCGCACGGTGGACTTCAAGAACACCGTGATCGTGATGACC
TCCAACCTCGGCAGCCAGATGATCCAGCAGATGTCAGGCGACGACTACGGCGTGATCAAGGTCGCGGTGATGGCCGAGGT
CAAGAACTACTTCCGGCCGGAGTTCATCAACCGGATTGACGAAGTGGTGGTCTTCCATGCGCTGGACGAAAAGCATATCG
CCGGCATCGCGAAGATTCAGCTAGGCTATCTCGAAAAGCGCCTGGCCCAGCTCGAAATGGGCATCGTGGTTGAAGACAGC
GCACTGGCCGAACTGGCGCAGGCCGGGTTCGACCCGGTGTTCGGGGCACGTCCGCTCAAGCGGGCGATCCAGCAGCAGAT
CGAGAATCCGCTGGCCAAGGCCATCCTGGAAGGGAAGTTTGGCGCCAAGGATACGATCAATGTTAGCTGCGATCCTGCCA
CCGGCGGCATCATGCGCTTCAGCAAGGCCTGA

Protein sequence :
MRLDKFTTKFQQSLADAQSLAIGGDQQFIEPQHLLLALINQDDGGTTSLLSRAGVNVPGLKRDLEQALTRLPQVQGHGGD
VSIGRDLNNLLNLTDKEAQKRGDQFIASEMFLLALCDDKNETGRIAKQHGFSRKSIEAAIMAVRGGQGVDSQEAEGQRES
LKKYCIDLTERAAQGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNEEVPETLKGKKVLVL
DMAGLLAGAKYRGEFEERLKAVLKEVAQDEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYR
KYIEKDAALERRFQKVLVEEPSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR
IKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKKRFGLIEEEIAKLTKEYSDLEEVWKAEKSAVLGSAQIKEEID
HLKADIARLQREGKLGEVAELQYGKLPQLEAQLKAAEKAGEGEGRKNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERE
KLLNMEDRLHKRVVGQDEAVRLVGDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTELCKALAEFMFDAEDHLIRIDMSEF
MEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMT
SNLGSQMIQQMSGDDYGVIKVAVMAEVKNYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLGYLEKRLAQLEMGIVVEDS
ALAELAQAGFDPVFGARPLKRAIQQQIENPLAKAILEGKFGAKDTINVSCDPATGGIMRFSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-109 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-101 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_2727 YP_285927.1 ATPase AAA VFG2076 Protein 8e-111 45
Daro_2727 YP_285927.1 ATPase AAA VFG2084 Protein 2e-108 41