Gene Information

Name : Daro_2644 (Daro_2644)
Accession : YP_285844.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : lytic transglycosylase, catalytic
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 2841019 - 2841567 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTCTGCTGGCTGTTGCCCCATTTGCTGCCCTTGCCATTCTGGCAACCAAGCCCACCTGGGCCCTAGCCTGCTGGGA
AGAAGCAGCTCAACGCTACGGCATATCAGCCGAGTTGCTCTACGCCATCGCCCGTGTCGAATCGAACCTGAATCCGAACG
CGGTCAACCGCACGCATATACAGCGCACCGGCTCCTACGATATCGGACTCATGCAGATCAACAGTGGCCATCTTTCAACC
CTGTCACGCCACGGCATCAAGGAAGCAGATCTCTTCGTACCATGCACCAACATTCAGGTCGGTGCCTGGTTGTTGTCCGA
CCTGTTCTCCCGGCAGGGCGCGACCTGGGATACGGTCGGTGCCTACAATGCCGCCTGCTCACAACTCAAGGGTGAAGCCT
GCTCCAAAGCCCGCGCCCAATACGCCTGGCGGGTGTATCGCCAGTTGCCCGCGCAACATGGCAGCCAACTCTCCGGGGAA
ATAAAGAGGGGCAAACAGACGCCCCGAGGCGAAACATTCGCCCTGATGTCGGTAAGGGTGGCGCCATGA

Protein sequence : 
MRLLAVAPFAALAILATKPTWALACWEEAAQRYGISAELLYAIARVESNLNPNAVNRTHIQRTGSYDIGLMQINSGHLST
LSRHGIKEADLFVPCTNIQVGAWLLSDLFSRQGATWDTVGAYNAACSQLKGEACSKARAQYAWRVYRQLPAQHGSQLSGE
IKRGKQTPRGETFALMSVRVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-18 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-18 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 1e-18 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 1e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_2644 YP_285844.1 lytic transglycosylase, catalytic VFG0539 Protein 3e-19 41