Gene Information

Name : Daro_2440 (Daro_2440)
Accession : YP_285645.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2640871 - 2642151 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACAATAGCAGTGGTGGGCTTGGGATATGTTGGTTTGCCCTTGGCAGTGGAATTTGGCAAAAAATATCGGACGAT
TGGATTTGATCTCTCGACGCACAAGATCGAATGCTATAAAAAGCACTACGATCCCACGGGGGAAGTCAGTACCGACGATC
TAAAAGCAGCTACGTTGCTAGAAGTTGGCACAGATCCCGCGGCCATCCGTGAGGCTGACTTTGTTGTTGTTGCCGTGCCC
ACTCCTGTAGATGATGCCCATCAGCCTGATTTCTCCCCACTAGTCGGCTCATCGACGGCTGTTGGCCAAAATCTAAAACA
AGGTGCGATTGTCGTTTTTGAATCGACCGTTTACCCCGGTGCCACCGAAGAAGTTTGTATTCCAATTATCGAAAGAGAAT
CCGGAAAAACGTGGAAGAAAGACTTTTTCGTTGGCTATTCGCCTGAGCGCATCAATCCTGGCGATAAGGAAAGAACCGTC
ACCAAGATCATCAAGATAGTCTCTGGTGACACCCCTGAGACACTGGCCACGGTACAGGAAATCTACGGCAGCATAATCAC
GGCCGGTGTCTACCCAGCATCGAACATCAAGGTTGCAGAAGCCGCCAAGGTAATCGAGAACACGCAGCGTGACCTGAATA
TTGCGTTGATGAACGAACTGGCGATCATATTTGACAAGATAGGCATCGACACACTGGAGGTCTTGCAAGCGGCCGGTACA
AAGTGGAATTTCCTTCCCTTCCGCCCGGGCCTGGTCGGTGGGCACTGTATTGGCGTTGACCCGTACTACCTGACCCACAA
GGCACAAAAGCTGGGCTATCACCCGGAGGTCATTCTTGCCGGCCGCCGTATCAATGACGGAATGGGGAAGTTCATCGCCG
AGCAAACGATCAAGATGCTCGTCAAGGCAGGGCACCCGGTCAAGGATTGCCCAATTATTGTGCTGGGCCTTACCTTCAAG
GAAGACTGTCCCGACCTACGCAACTCAAGAGTCATCGATGTCATTCGGGAACTGGAATCCTACGGCGCCAAGGTGGTAGT
TCACGACCCAGTTGCCGATGCAGCCGAGGCGCGTCACGAATATGGCGTCGATCTAGTTGCCTGGAACGATCTGCCAAAGG
CAGCAGCCATTGTCGCAGCCGTCAATCACAAGGAATACAAAGCCCTTCCAATTGGCGACTTTCTGGCTAGACTGGAAAAA
GATGGCGTAATCGCCGACGTCAAGAGCATGCTTGATAGCAAGGCCTTTTCGGAAAACGGTATTACTGTTTGGCGACTATA
A

Protein sequence : 
MTTIAVVGLGYVGLPLAVEFGKKYRTIGFDLSTHKIECYKKHYDPTGEVSTDDLKAATLLEVGTDPAAIREADFVVVAVP
TPVDDAHQPDFSPLVGSSTAVGQNLKQGAIVVFESTVYPGATEEVCIPIIERESGKTWKKDFFVGYSPERINPGDKERTV
TKIIKIVSGDTPETLATVQEIYGSIITAGVYPASNIKVAEAAKVIENTQRDLNIALMNELAIIFDKIGIDTLEVLQAAGT
KWNFLPFRPGLVGGHCIGVDPYYLTHKAQKLGYHPEVILAGRRINDGMGKFIAEQTIKMLVKAGHPVKDCPIIVLGLTFK
EDCPDLRNSRVIDVIRELESYGAKVVVHDPVADAAEARHEYGVDLVAWNDLPKAAAIVAAVNHKEYKALPIGDFLARLEK
DGVIADVKSMLDSKAFSENGITVWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-106 56
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-98 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-98 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_2440 YP_285645.1 UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding VFG0431 Protein 6e-99 56