Gene Information

Name : Daro_2259 (Daro_2259)
Accession : YP_285466.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2446519 - 2447196 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCCTGGTCGTGGAAGACGAACAGAAAACCGGCGATTACCTGCGGCAGGGGCTAATGGAAGCGGGCTTCATCGT
CGATCTGGCGCGTGACGGATTCGACGGGTTGCACCTGGCGCTGACCGAGGCCTACGATCTGGCAGTCCTCGACGTGATGC
TGCCCGGCATCGACGGCTGGCAAGTGCTGCAAGGCATTCGCCGGGCCGGCAAGGACATGCCGGTGCTCTTTCTGACGGCT
CGCGATGACGTCGAGGACCGAGTCAAGGGGCTGGAACTTGGGGCCGATGACTACCTGGTGAAACCTTTCGCCTTTTCTGA
ACTGCTGGCCCGTGTCCGAACCCTGCTTCGGCGCGGCGGCAAAGCAAAGGAATCCGATCTCCTGAACGCGGCCGACCTCG
AACTCGACCTGATGCGTCGTCGGGTTACCCGATCCGGCAAGAAAATCGACCTGACCTCGAAAGAGTTCGCGCTGCTGGAA
GTTCTTTTGCGGCGTCAGGGCGAGGTGCTGCCGCGCTCGCTGATTGCCTCCCAGGTGTGGGACATGAACTTCGACAGCGA
TACAAACGTCATCGAGGTCGCCATCCGGCGGCTGCGGGCCAAGGTGGACGACGGTTTCGAGCCGAAACTAATCCGGACGG
TTCGAGGCATGGGCTATGTGCTGGAGACAGCCGAGTGA

Protein sequence :
MKILVVEDEQKTGDYLRQGLMEAGFIVDLARDGFDGLHLALTEAYDLAVLDVMLPGIDGWQVLQGIRRAGKDMPVLFLTA
RDDVEDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGGKAKESDLLNAADLELDLMRRRVTRSGKKIDLTSKEFALLE
VLLRRQGEVLPRSLIASQVWDMNFDSDTNVIEVAIRRLRAKVDDGFEPKLIRTVRGMGYVLETAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-58 61
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-57 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0638 Protein 2e-65 72
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0083 Protein 7e-70 71
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0197 Protein 3e-66 71
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0111 Protein 4e-71 67
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0308 Protein 9e-67 65
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0125 Protein 1e-63 63
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator BAC0347 Protein 9e-63 61
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_007793.3914065.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002758.1121390.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_010079.5776364.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002952.2859858.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_007622.3794948.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_003923.1003417.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_013450.8614146.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002951.3238224.p0 Protein 2e-34 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 4e-28 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002952.2859905.p0 Protein 1e-32 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_007622.3794472.p0 Protein 1e-32 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002745.1124361.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_009782.5559369.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002951.3237708.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_003923.1003749.p0 Protein 8e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_002758.1121668.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_009641.5332272.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_013450.8614421.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator NC_007793.3914279.p0 Protein 9e-33 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator U82965.2.orf14.gene. Protein 5e-29 42
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator AE015929.1.gene1106. Protein 8e-31 41
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator AE000516.2.gene3505. Protein 5e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator VFG0596 Protein 4e-59 61
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator VFG1390 Protein 7e-41 48
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator VFG1389 Protein 3e-33 45
Daro_2259 YP_285466.1 two component heavy metal response transcriptional regulator VFG0473 Protein 1e-28 41