Gene Information

Name : Daro_2108 (Daro_2108)
Accession : YP_285321.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Unknown
Product : transposase IS4
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3666
EC number : -
Position : 2276887 - 2278368 bp
Length : 1482 bp
Strand : -
Note : -

DNA sequence :
TTGGCAGTCGCGATCAATGCAATAGGCATTGACGACAAGGCGACCAAGATGAAGCGTTTTATCCAGGGCGAGAGCCGAAC
CCAAAGCACTTTGCTTCCCGCAGTGCTGGATGACTACATCGCGGATACCAACCCGGTTCGGGTTGTCGATGTCTTTGTTG
ATGAACTGTCGCTGGGAGTCTTGGGTTTTGCGAGCGTTGATCCGGCGACGACAGGGCGTCCTGCTTACCACCCGGCCGTG
TTGCTGAAGCTGTATATCTACGGCTACCTCAACCGTATTCCGTCGAGTCGGCGGCTGGAGCGGGAAGCCCAGCGCAACGT
CGAACTGATGTGGCTCACCGGGCGCCTGACGCCCGACCACAAGACTATCGCCAATTTCCGTAAGGACAACGGTCCAGCGA
TCTGCAAGGTCTGCCGGCAATTCGTGGTCATATGCCGGCAACTCAAACTATTCACGGAGGCGCTGGTCGCCATCGACGGC
AGCAAATTCAAAGCCGTCAATAATCGTGACCGGAATTTCACGAGCGCCAAATTACAGCGGCGGATGGCTGACATCGAGGC
GAGCATTCAGCGTTATCTAACTGACCTCGAGACTGCGGATCGGCAGGAACCGGAGATTGCCCAGGCCAAGGCGGCTCGGC
TCAATGACAAGATCGCGGCCCTGAAGGCACAGATGCAGCAACTCCAAGTCATCGAAACCCGGTTGGGGCAATCACCCGAC
GGGCAACTCTCTTTAACCGACCCCGATGCCCGCTCGATGAAAACTCGGAGCACCGGGATTGTGGGCTACAACGTGCAGAC
CGCAGTGGAAGCCAAACACCATCTGATTGTGGCACACGAAGTCACCAATGTTGGCATTGATCGGGATCTTCTGGTCGGCA
TGGCGAAGCGGGCACGAGAAGCCATTGGTGGCGGTGATCTGACAGTGATTGCCGATAGAGGCTACTTTAAAGGTGAGCAG
ATTCTGGCCTGCGAAGAAGCGGGGATCACGGCCATCGTCCCTAAAACCAGCACCTCGGCCGCTAAGGCTGAGGGCCGCTT
CGATAAAGCTGATTTCATCTATGACCCTACGGCCGATGAATACCGCTGCCCGGCCAATCAGCATCTCATCTGGCGCTTCG
CCCGCGTCGAAGGCGGTCTGATGATGAACCGTTACTGGAGTTCAGCCTGTCCACAATGTGCCATCAAGGCGCAATGTACG
CCGAGTGACTACCGGCGGGTCAGTCGCTGGGAACACCAGGCGGTGCTTGATGTCATGGAACGCCGGCTGGATCGCGCGCC
AGACAGCATGCGCATTCGCCGACAGACGGTGGAGCATCCGTTCGGGACCCTCAAGGCATGGATGGGCGCCACCCACTTTC
TGACCCGTACCCTGGAAAAGGTAAGAACGGAGATGAGTTTGCAGATACTCGCCTACAACCTGAAACGGGTGATGAATCTC
TTGGGCGTGAATGAGTTCATGGCAGCATTGCAGGCGGCCTGA

Protein sequence :
MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGVLGFASVDPATTGRPAYHPAV
LLKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDG
SKFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPD
GQLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRAREAIGGGDLTVIADRGYFKGEQ
ILACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCT
PSDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNL
LGVNEFMAALQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG74 AAN62296.1 transposase domain protein Not tested PAGI-3(SG) Protein 0.0 75
tnpA ACY75519.1 transposase Not tested Tn6060 Protein 0.0 75
tnpA ACY75536.1 transposase Not tested Tn6060 Protein 0.0 75
unnamed CAD91340.1 hypothetical protein Not tested Not named Protein 0.0 75