Gene Information

Name : Daro_1827 (Daro_1827)
Accession : YP_285043.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1965079 - 1966476 bp
Length : 1398 bp
Strand : +
Note : -

DNA sequence : 
ATGCGAAAATTGTCGTTGAAAACAGTGATTGGCGGAGACATGGAAGAAAGCTTGGTCGGCGAACGCGAGGCGCCTTGGCG
GCAGTATTCGGTACTGATTGTTGATGATGAACCGGGGATGCTCAGTTTCCTGCAGCGGGCCTTGAGTTCGCGCTGTGGCC
TGGTTGATTGCGCCGACGCGGTCGAAGCCGCGCGGCCCATGTTGAGTCGCAACCGTTACGACCTGATCGTGCTCGACATT
GCTTTGCACGGTTGTTCCGGCATCGACTGGCTACACGAGCTGCGCCAGGATGGTTACGCCGGTGACGTCGTGTTGATGAC
CGCTTATGCCGATCTCGATACGGCGATCGACGCCCTGCGGGCCGGTGCCGCCGATCTGCTGCAAAAACCCTTCTCGCTGG
CGCTGGCCCTGAATGCCATCCAGCGTTGCTTCGAACGCTCGTCGCTGGCGCGCGAAAATTTTGTGCTGCGCCGTGAAGTC
AGCACGCATGCGGTCGATATCGAAGGGGTGGTCGGGCAGTCCGACCTGATGATCAAGGTCTGCGAGCGCCTGAAGCGCAT
TGCGCCGACGCCGGCGACCGTTTTGCTCAGCGGCGAATCCGGTACGGGCAAGGAAGTGGCTGCCCGTGCCTTGCACCGCA
TGAGCCAGCGGGCTGCCGGACCTTTTGTGCCTGTCAATTGTGCCGCCATTTCCGCCGAGTTGATCGAGTCCGAGCTATTC
GGTCACATCAAAGGTGCTTATACCGGGGCGCAGCAAAACCGCGAAGGCCTGTTCTATTACGCCCGGGGCGGCACGCTCTT
CCTGGACGAAATTTCCGAATTACCATCCGCCGCCCAGGCCAAGCTGCTGCGCGTGCTGGAAGAGCGCCGGATCAGGCCGG
TCGGCTCGGAGCAGGAAGTGGCGGTCGATGTCAGGGTGATCGCGGCCACCAACCGCGATCTGAAAACCGAGGTGGCCGCC
CAGCGCTTTCGACAGGATCTATACTACCGACTGCAGGTGCTGGAGGTCACGCTGCCGCCGTTACGCGAGCGGCCAGAGGA
TATTCCGCTGCTGGTCGAGCATTTCATGGCCCAGCTCACGCCCAACCTTGGTGTGCCGCCGCTCGGCCTCGATCCACGCA
CGCTGGCGCGAATGGCCGATTACGACTGGCCGGGCAATGTCCGTGAATTACGCAATCTGGTCGAGCGTTCGCTGATTCTC
GGCTGGTTCGACATCGGGCCGGAACCGGAAATGGGCATCAACGTTACAGTGGGAAGCGACGAAACGCTGGAGGCCGTTGA
AAAACGCCACATTCTTGCCGTGCTGGCGGCCTGTGAAGGCAATAAGTCGGAAGCCAGCCGGCGCCTCGGCATTTCCCGCA
AGACGATGGACCGCAAGTGCCAGGCCTGGGGTCTCTGA

Protein sequence : 
MRKLSLKTVIGGDMEESLVGEREAPWRQYSVLIVDDEPGMLSFLQRALSSRCGLVDCADAVEAARPMLSRNRYDLIVLDI
ALHGCSGIDWLHELRQDGYAGDVVLMTAYADLDTAIDALRAGAADLLQKPFSLALALNAIQRCFERSSLARENFVLRREV
STHAVDIEGVVGQSDLMIKVCERLKRIAPTPATVLLSGESGTGKEVAARALHRMSQRAAGPFVPVNCAAISAELIESELF
GHIKGAYTGAQQNREGLFYYARGGTLFLDEISELPSAAQAKLLRVLEERRIRPVGSEQEVAVDVRVIAATNRDLKTEVAA
QRFRQDLYYRLQVLEVTLPPLRERPEDIPLLVEHFMAQLTPNLGVPPLGLDPRTLARMADYDWPGNVRELRNLVERSLIL
GWFDIGPEPEMGINVTVGSDETLEAVEKRHILAVLAACEGNKSEASRRLGISRKTMDRKCQAWGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-65 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-65 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_1827 YP_285043.1 Fis family transcriptional regulator BAC0467 Protein 4e-71 44
Daro_1827 YP_285043.1 Fis family transcriptional regulator BAC0089 Protein 5e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_1827 YP_285043.1 Fis family transcriptional regulator VFG1249 Protein 5e-57 42
Daro_1827 YP_285043.1 Fis family transcriptional regulator VFG1214 Protein 2e-70 41