Gene Information

Name : Daro_1277 (Daro_1277)
Accession : YP_284499.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1386501 - 1387061 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCGTCTTTTTGATCTGGTTCTGGCGCTGGCCGCCGTTTGCATATTTGCCATTCCACTGGCGGTGGTTGCCTTGCT
GGTCAAGGCCACTTCGCCGGGGCCGATCCTGTATTGGTCCGATCGTGTCGGGCGGCACAACCGGATATTCCGCATGCCGA
AGTTCCGCAGCATGCGGGTCGGCACGCCGGCCGTCGCCACCCATCTGCTGAACAACCCCGCCACTCACCTGACGCCGATC
GGTTCGTTCCTGCGCCGTTCCAGCCTCGATGAACTGCCGCAGGTTTGGAGTATATTGGTCGGCGATATGAGCTTTGTCGG
CCCGCGTCCGGCCTTGTTCAACCAGGACGACTTGGTCGCCCTTCGCACCGAGGCGGGTGTTCACGAGTTGCAACCGGGTC
TGACCGGGTGGGCGCAGGTCAACGGCCGGGATGAGTTGCCAATTCCACAGAAGGTCGCTCTCGATGTCGAATATCTTCGC
CGGCAGAGCTTCTGGTTCGATCTCCGGATCATTTGGCTGACCGCCCTCAAGGTCGTGAGAAGCGACGGCGTTTCACATTA
G

Protein sequence : 
MKRLFDLVLALAAVCIFAIPLAVVALLVKATSPGPILYWSDRVGRHNRIFRMPKFRSMRVGTPAVATHLLNNPATHLTPI
GSFLRRSSLDELPQVWSILVGDMSFVGPRPALFNQDDLVALRTEAGVHELQPGLTGWAQVNGRDELPIPQKVALDVEYLR
RQSFWFDLRIIWLTALKVVRSDGVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-37 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-35 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_1277 YP_284499.1 sugar transferase VFG1369 Protein 5e-28 48
Daro_1277 YP_284499.1 sugar transferase VFG1309 Protein 5e-37 46