|
Name : Daro_1220 (Daro_1220) Accession : YP_284446.1 Strain : Dechloromonas aromatica RCB Genome accession: NC_007298 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 1323197 - 1324606 bp Length : 1410 bp Strand : + Note : - DNA sequence : ATGAACCAACGTCCTCAGAAACCCCGTATTCCCGATTCCACGCTGGACCACTTGCGCGTGCCGCCGCATTCGATCGAGGC CGAACAGTCGATCCTTGGCGGCTTGTTACTCGACAATCAGGCCTGGGATCGGATGGGCGATATGCTGACCGATGCCGATT TCTATCGCGATGAACATCGGCGTATCTTCCGGCAAATTCGTAATCTGCTCGAAAAGGCCAAACCGGCTGACGTGGTTACG GTGGCCGAGGCATTGGATGCGGCGGGGGAGGGTGAGCAGACCGGTGGCTTGGCTTATCTCGGTGAGCTGGCAGCGAATAC ACCATCGGCGGCCAATATCAAACGCTATGCCGAAATCGTTCGCGAGCGCTCCGTATTGCGCCAGTTGGTGGCAACCGCCG ACGAAATTGCAGCCGATGCCCTGAATCCGCTTGGGCGGGATGCTGAAACTCTGCTCGACGAGGCAGAGTCAAAAATCTTC AAGATTGCCGAGGCCGGGGCTGGTCACAATGAAGGCTTCGTGCACATCAATCCCTTGCTCACCCAGGTGGTCGAGCGTAT TCAGGAATTGCATGATCGCGACAACCCTTCCGATATCACCGGGGTGCCGACCGGATTTATCGATCTGGATTCGAAGACCT CCGGCTTTCAGCCGGGCGATCTGATTATCGTTGCCGGGCGCCCGTCAATGGGTAAAACCGCCTTTGCCTTGAATATTGCC GAGAATGTGGCGGTCGACTCCGGTTTACCGGTTGGTGTCTTCTCCATGGAAATGGGCGGCGCCCAGCTCGCCATGCGGAT GCTGGCCTCGATCGGGCGTCTGAACTCACAGAGCCTGAGAACGGGGCGCATGAGCGACGAAGAATGGTCCAAGTTGTCGT TTGCGCTGGGCAAGCTACACGAGGCGCCGATCTATATCGATGAAACCGGCGGCTTGAGTCCGGCTAACCTGCGGGCCAGA GCACGGCGCCTGGCGCGCCAGTATGGCGGCAAGCTTGGCTTGCTGGTCATCGACTACATCCAGCTGATGTCGGGTAACCG CCAAGGCGAGAACCGGGCGACGGAAGTGTCCGAGATTTCGCGCTCGATCAAGTCGCTGGCCAAGGAATTGCAGGTTCCAA TCGTGGCGTTGTCACAGCTTTCCCGGAAGGTCGAGGAGCGTACCGACAAGCGTCCGATGATGTCCGACTTGCGCGAATCC GGCGCTATCGAGCAGGATGCCGACGTGATCCTGATGATGTACCGCGATGAGTACTACAACAAGGATAGCAACGATAACAA GGGCTTGGCCGAAGTGATCATCGGCAAGCAGCGTAACGGCCCGACCGGGACCGTACGCTTGGCCTTCATTGGCGAATACA CCCGTTTCGAGAATCTGGCCAGCGGCGGTTTTGTCGATTCCCAGAACTAG Protein sequence : MNQRPQKPRIPDSTLDHLRVPPHSIEAEQSILGGLLLDNQAWDRMGDMLTDADFYRDEHRRIFRQIRNLLEKAKPADVVT VAEALDAAGEGEQTGGLAYLGELAANTPSAANIKRYAEIVRERSVLRQLVATADEIAADALNPLGRDAETLLDEAESKIF KIAEAGAGHNEGFVHINPLLTQVVERIQELHDRDNPSDITGVPTGFIDLDSKTSGFQPGDLIIVAGRPSMGKTAFALNIA ENVAVDSGLPVGVFSMEMGGAQLAMRMLASIGRLNSQSLRTGRMSDEEWSKLSFALGKLHEAPIYIDETGGLSPANLRAR ARRLARQYGGKLGLLVIDYIQLMSGNRQGENRATEVSEISRSIKSLAKELQVPIVALSQLSRKVEERTDKRPMMSDLRES GAIEQDADVILMMYRDEYYNKDSNDNKGLAEVIIGKQRNGPTGTVRLAFIGEYTRFENLASGGFVDSQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-92 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-82 | 47 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-82 | 47 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 9e-83 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-81 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-81 | 47 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-83 | 46 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-81 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-65 | 43 |
