Gene Information

Name : Daro_1008 (Daro_1008)
Accession : YP_284234.1
Strain : Dechloromonas aromatica RCB
Genome accession: NC_007298
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1100668 - 1102188 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTACGCATCCCCCGGTACCGCCGGCGCCAAGATCGCCTACAAAGCTCAATACGACAACTTCATTGGCGGCAAGTG
GGTCGCCCCGGTCAATGGCCAGTACTTTGACGTCGTCACTCCGATTTCCGGCAAGCCTTACACCAAGGCTGCCCGCTCCA
CCGCCGAGGACATGGAACTGGCACTGGACGCCGCCCATGCCGCCTTCCCGACCTGGGGCAAGACCTCTGCCGCCGACCGC
GCCAACGTGCTGCTGAAGATCGCCGACCGCCTCGAAGCCAACCTCGAACTGCTCGCCTATGCCGAGACGGTCGATAACGG
CAAGGCCATTCGCGAAACCCTGAACGCCGACATCCCGCTCGCCGTCGACCACTTCCGTTACTTCGCCGGCTGCCTGCGCG
CCCAGGAAGGCGGCATTTCGGAAATCGACGAAAACACCATGGCTTACCATATCCATGAGCCCCTCGGCGTTGTCGGCCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCGGCCTGGAAACTGGCCCCGGCCATCGGCGCCGGCAACTGCGTGGTGCT
CAAGCCAGCTGAATCGACCCCGATCTCCATCCTGATCCTGGCCGAACTGATCGCCGACATTCTGCCGGCCGGCGTGCTGA
ACATCGTCAACGGCTATGGCCGCGAAGCCGGCATGCCGCTCGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCGACCTCCACCGGCCGCGTCATCGCCCAGGCCGCTGCCAACAACCTGATTCCGGCCACCCTGGAACTCGGCGGCAAGTC
ACCGAACGTCTTCTTCGCCGACATCATGGACAAGGATGACAGCTTCCTCGACAAGGCCGTCGAAGGCATGGTGCTGTTTG
CCTTCAACCAGGGCGAAGTTTGCACCTGCCCGTCGCGCGCCCTGATCCAGGAATCGATCTACGAGAAGTTCATGGAGCGC
GTCCTGAAGCGTGTGGCTGCCATCAAGCAGATCAGCCCGCTCGATACCGACTGCATGATGGGTGCCCAGTGCTCGCAGGA
ACAGATGACCAAGATCCAGTCCTATCTGGAACTCGGCAAGCAGGAAGGCGCCGAATGCCTGATCGGTGGCGAACGCGCTC
ATCTGGGCGGCGACCTTGAAGGCGGCTACTACATCCAGCCGACCATGTTCAAGGGTCACAACAAGATGCGCATCTTCCAG
GAAGAAATCTTCGGGCCGGTGCTCGCTGTGACCACCTTCAAGGACGAAGCCGAAGCCCTGGCCATCGCCAACGACACCAT
CTACGGCCTCGGCGCCGGCGTCTGGAGCCGTAACGGCAACGTCGCCTACCGCATGGGTCGCGCCATCCAGGCCGGCCGCG
TGTGGACCAATTGCTACCACGCCTACCCGGCGCACGCTGCCTTCGGCGGCTACAAGGAATCCGGTATCGGCCGCGAGACC
CACAAGGTCATGCTCGACCACTACCAGCAAACGAAGAACCTGCTTGTTTCGTACAGCGAAACCAAGCTGGGCTTCTTCTA
A

Protein sequence :
MLYASPGTAGAKIAYKAQYDNFIGGKWVAPVNGQYFDVVTPISGKPYTKAARSTAEDMELALDAAHAAFPTWGKTSAADR
ANVLLKIADRLEANLELLAYAETVDNGKAIRETLNADIPLAVDHFRYFAGCLRAQEGGISEIDENTMAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPAIGAGNCVVLKPAESTPISILILAELIADILPAGVLNIVNGYGREAGMPLATSKRIAKIAFTG
STSTGRVIAQAAANNLIPATLELGGKSPNVFFADIMDKDDSFLDKAVEGMVLFAFNQGEVCTCPSRALIQESIYEKFMER
VLKRVAAIKQISPLDTDCMMGAQCSQEQMTKIQSYLELGKQEGAECLIGGERAHLGGDLEGGYYIQPTMFKGHNKMRIFQ
EEIFGPVLAVTTFKDEAEALAIANDTIYGLGAGVWSRNGNVAYRMGRAIQAGRVWTNCYHAYPAHAAFGGYKESGIGRET
HKVMLDHYQQTKNLLVSYSETKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-141 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-150 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-150 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-150 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-150 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daro_1008 YP_284234.1 aldehyde dehydrogenase VFG0082 Protein 4e-142 64