Gene Information

Name : MS53_0612 (MS53_0612)
Accession : YP_278730.1
Strain : Mycoplasma synoviae 53
Genome accession: NC_007294
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 718681 - 719568 bp
Length : 888 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx; COG1136

DNA sequence : 
TTAAATAAAAAAGAGCTTGGCGTAAAAGTAACTAAGAAAAATATCTTTGAGCTTCTTGACAAAGACGGCGGAAAAAATAA
AGTTTTAGTCGATGCTAAAATTGCCAAAATTCTAAAAAAAGCCAGCAGCAAAAAAAGAGCTAAAGACGAGCAAAAAGCTT
TAACAAATTCTAAAGATGCAATTATAGAAGTTAGAAACGTTTCTAAATACTATCTTTCAGGAAATGTTGTAACTCGGGTT
TTAAAAGATATTTCAGTTACTATTAATAAAGGTGAATTTGTCTTAATTTACGGTAAATCAGGTGGCGGAAAATCAACACT
GCTTAACTTAATTTCAGGACTTGATCGTCCTAATAATGGTCATATAATAGTATGCGATACTAATCTTCCATACTATAGCG
ATTCGCAGCTAACATACTTTAGAAGAAAGCACGTTAGCTTTATCTTCCAAAACTATAACCTTTTAAATAATTTAAATGGT
TATGATAATGTTTTAACAGGAGCTTATCTTCAAAAAGATAAATCAAAAAAATTAGACATTGATGAGTTATTTAAAGAATT
TGATCTTTTAGATATAAAAGATAAATATCCATCACAAATGTCAGGAGGTCAGCAGCAAAGAGTTTCAATTTTAAGAGCGC
TAGCTAAAAACGCTGAAATTATCTTTGCCGACGAGCCTACCGGAGCTCTTGACGAAAAAACTTCGCAAATAGTTTTATCT
TATTTAGTTGATATCAACCAAAAGCTAAAAACTACCATTGTAATGGTTACCCACGATCCTAAAGCTACTGAAATTGCAAA
TAAAGTCATAACAGTATCAAAAGGAAAAATTGAAAGTGTTAAAATAAATAAAAGTCCAAAACATCCAAAAGAAATATATC
TACATTAA

Protein sequence : 
MNKKELGVKVTKKNIFELLDKDGGKNKVLVDAKIAKILKKASSKKRAKDEQKALTNSKDAIIEVRNVSKYYLSGNVVTRV
LKDISVTINKGEFVLIYGKSGGGKSTLLNLISGLDRPNNGHIIVCDTNLPYYSDSQLTYFRRKHVSFIFQNYNLLNNLNG
YDNVLTGAYLQKDKSKKLDIDELFKEFDLLDIKDKYPSQMSGGQQQRVSILRALAKNAEIIFADEPTGALDEKTSQIVLS
YLVDINQKLKTTIVMVTHDPKATEIANKVITVSKGKIESVKINKSPKHPKEIYLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MS53_0612 YP_278730.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-32 44
MS53_0612 YP_278730.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-33 42