Gene Information

Name : PSPPH_B0057 (PSPPH_B0057)
Accession : YP_272312.1
Strain :
Genome accession: NC_007275
Putative virulence/resistance : Virulence
Product : resolvase, putative
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 48080 - 48655 bp
Length : 576 bp
Strand : +
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796; match to protein family HMM TIGR01199

DNA sequence :
ATGCTGATTGGATATGCCCGAGTCTCAACCGATGATCAGCTCCTCGATCTGCAACGCGATGCGTTGGAGAAAGCGGGTTG
CGAGCGCGTGTTCGAAGACACCGCCAGCGGTGCCAAGGCAGAACGGATTGGTCTGACTGCCTTGCTGGCCACACTACGCC
GGGGCGACACCGTGGTGATTTGGCGGCTGGATCGTCTTGGCCGCTCGCTGAAGGATCTGATTCGTCTGGTCGAGCAGTTG
GACGCCGCCGGCGTTGGCTTGCGCAGCTTGCAGGAAAGCATCGACACCGCCTCGATTGGCGGACGCCTAGTGTTCCACCT
GTTTGGTGCCCTGGCCGAGTTCGAGCGCAACTTGATCCGCGAGCGTACCCAGGCGGGGTTGTCAGCAGCACGAGCGCGTG
GACGCAAGGGCGGACGCAAGAAGCGGCTCGATCCCGCCAAGCAAGAACTGGCCATGCGCCTGTATCACGAGCGAAAACAC
ACCGTGGCAGAGATCTGCCGCCTGATGGGCATCGGTCGTTCGACTCTCTACAACTATCTGACCGAGGCCGAACGCAATGC
CCAGCGGGCGGCATAG

Protein sequence :
MLIGYARVSTDDQLLDLQRDALEKAGCERVFEDTASGAKAERIGLTALLATLRRGDTVVIWRLDRLGRSLKDLIRLVEQL
DAAGVGLRSLQESIDTASIGGRLVFHLFGALAEFERNLIRERTQAGLSAARARGRKGGRKKRLDPAKQELAMRLYHERKH
TVAEICRLMGIGRSTLYNYLTEAERNAQRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-28 55
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-28 55
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-28 55
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-28 55
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 6e-31 50
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 5e-29 50
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 6e-29 50
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 6e-29 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 8e-28 48
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-28 48
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-28 48
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-16 42
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-15 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-15 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_B0057 YP_272312.1 resolvase, putative VFG1030 Protein 6e-16 41