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Name : PSPPH_A0064 (PSPPH_A0064) Accession : YP_272180.1 Strain : Genome accession: NC_007274 Putative virulence/resistance : Virulence Product : outer-membrane fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 52693 - 55188 bp Length : 2496 bp Strand : + Note : identified by match to protein family HMM PF00577 DNA sequence : ATGCGTCGCCTTGCCTATGCTCTGTCCTTACCTGCAGCATGTTTTTTTACTTCCGTTCAGGCGCAGACTTACCATTTTGA TCCGGCGTTGCTAGGGAGCTCTGCGAAGCATACCGATCTTTCACTGTTCAACCGAGGGCTACAGCAGCCAGGCAGGTATC ATTTAGATGTAATGCTTAATGACGAGCAGGTCGACAGCCAAGACATTACACTGAGTTTGAAAAAAAATGCTGCCGGCATC AGCGTGCTTGATCCCTGCCTCAGCTTAGAACAATTATCGCGATGGGGCATTAAAACAGAAGCAATTCCAGGTCTGAATCG CACATCAAATGCAGGGGCTTGCGTCATACTTGAGAGTATACCCGAGTCCACTGTAAACGCAGACATTGCGAACCAGCAGC TGCAACTGCAAGTACCGCAATCATTCATGCGTCCAAACTATAGAGGTTTAGCGCCTCAGGGCCTATGGGATGATGGGATC ACGGCATTTTTAATGAACTACAGTGCAGGAGCATCACGCGTGGACAGCCGAGACATAGGGGCCAACGACACATCCTCTTG GGCGCAACTTCAGCCGGGCTTCAATCTCGGACCATGGCGAGCAAGAAGTTCGTTTAGTTGGAAGGATGGGGGGGATTTGC AGCGCTCTTATGCCTATGTTGAACGTGGAGTTAGGGGATTCAAAAGCCGCCTATCCTTAGGTGAACGAACGTCACCGGGT GATGTATTCGATGGCGTCCCTTTCACCGGTGTAATGCTCGCTACGGACGATACTATGTTCCCTGCCAGTGAGCGTAGCTT TGCACCTACGGTGAGCGGTGTAGCGCTTACACGTGCCAGAATCGAAGTCCGTCAGAACGGCTACATTATCAAGACCCTAT CCGTACCGCCAGGACCTTTCGAAATTCAAGACCTTGCTGCTAGCAGCGGCAATGGGGATCTGCACGTGGCGGTATATGAG GCCGACGGCAGAAATCAGTTCTTTATCGTGCCTTGGAACACGCCTGCCATTGCTCTGCACAAAGACCATTTAAAATACAG CGTGACAGCTGGCCGTTATCGCTCAGCAGAAAGCCGCACACCTGAGGCCTTGTTGATCCAAGCCACAGCTATCTATGGCC TACCCTGGAATCTGACGGGTTACGGTGGTCTGCAGGGAGCCACACATTACGGCGCCGCATCGTTAGGCGTAGGTGCAATG CTGGGAGGCTGGGGCGCAGTCTCGGTGGACGCCACGGGCTCACGAAGCCAAACGCCAGGGGGGAACACGCAAGGAGGTTT GAAGTGGCGGCTACGCTACAGCACCCAACTGCCGTTAACGCATACCGCTGTTTCGCTCGCTAGCATGCAGTACGCCTCTG CTGGATACCGGTCTTTAACCGAAACGCTAGGCTCGCGACAGCGCGAGGAATTTGCGATCGACAAAGACTATAGCGGGCGC CGTCAGCGGGCGCGCAGCACATTGTCGTTGAGTCAAAAGCTGGGCCCGCTAGGCAGCTTGGGAATCAGCGCTTCGCGCAC CGACTGGCGCTACGGCCAAGGACATGACGATGGAATGGGGTTCAGTTGGAGTAAATCAATTCACAGCTTATCAGTGTCGA TTGAATGGCAACAAAACCGCTCTTTTGATGGCTGTCAGGACCGCACGTTGAGTGTATGGGTGAGCATTCCCATTGGCGGT AGCACAAACGCCAGTTGGACCCTTACGGCTCCCACCCGGGGCCAACAAGAACAAGAAGGCGGGCTAAATGGCCGAGCATT TGAAGACCGCTTGGCATGGGATGTCAGACAACGCTACCGCACTGACGTGTCCTCGGATCAGCGCAGCGGCAGCGATCTGC ATGCAAGTTGGAATGGCGCGAGTGGGCAGGTTGGTGTCGGGTATGGCTACAGCGCGACTAGCCGACAAGCAAATATGGAT GTGTCAGGCGGGGTAATTGTGCACCACGACGGGGTAACCCTGAGCCAACAGCTTTCAGACACGGTTGCACTTGTGAGCGC ACCAGGTGCTGCAGGGGTGCAAGTTGAGGGATGGCCTGGCGTCGAAACAGATAGACGAGGCTACACAGTAACCTCGAATC TCGTGGGCTACCAAGAGAATACAGTGAGTTTGAATCCGATAACTGTTCCAGACAACGCGGAAATACCGCAGACCGACGTA AAGATCGTGCCGACAGCCGGGGCAGTGGTTGAAGCAGCCTTTCGAACGCGCACTGGTGCCAAGGCCTTGGTTACCCTGCA CTACTCAGACGGATCTCCCGTCGCTTTCGGCTCACAGGTGACCGCAGAGGGGCGGGAAGGAAACGCCGGCATCACCGATG CAAAGGGTTTGGCCTATCTCACCGGCCTTTCCTCAAGCGGCACGCTCAGCGTACGTTCGGGCAACAAGATGTGCCATGCA AATTACGATTTGCCGGGGAATAAGGAAACGGCGGGACTTTATCAATTAGATGCCGTGTGTCTCGAGTCCTTAAAGAAGGA AATACCCCATGGCTGA Protein sequence : MRRLAYALSLPAACFFTSVQAQTYHFDPALLGSSAKHTDLSLFNRGLQQPGRYHLDVMLNDEQVDSQDITLSLKKNAAGI SVLDPCLSLEQLSRWGIKTEAIPGLNRTSNAGACVILESIPESTVNADIANQQLQLQVPQSFMRPNYRGLAPQGLWDDGI TAFLMNYSAGASRVDSRDIGANDTSSWAQLQPGFNLGPWRARSSFSWKDGGDLQRSYAYVERGVRGFKSRLSLGERTSPG DVFDGVPFTGVMLATDDTMFPASERSFAPTVSGVALTRARIEVRQNGYIIKTLSVPPGPFEIQDLAASSGNGDLHVAVYE ADGRNQFFIVPWNTPAIALHKDHLKYSVTAGRYRSAESRTPEALLIQATAIYGLPWNLTGYGGLQGATHYGAASLGVGAM LGGWGAVSVDATGSRSQTPGGNTQGGLKWRLRYSTQLPLTHTAVSLASMQYASAGYRSLTETLGSRQREEFAIDKDYSGR RQRARSTLSLSQKLGPLGSLGISASRTDWRYGQGHDDGMGFSWSKSIHSLSVSIEWQQNRSFDGCQDRTLSVWVSIPIGG STNASWTLTAPTRGQQEQEGGLNGRAFEDRLAWDVRQRYRTDVSSDQRSGSDLHASWNGASGQVGVGYGYSATSRQANMD VSGGVIVHHDGVTLSQQLSDTVALVSAPGAAGVQVEGWPGVETDRRGYTVTSNLVGYQENTVSLNPITVPDNAEIPQTDV KIVPTAGAVVEAAFRTRTGAKALVTLHYSDGSPVAFGSQVTAEGREGNAGITDAKGLAYLTGLSSSGTLSVRSGNKMCHA NYDLPGNKETAGLYQLDAVCLESLKKEIPHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 51 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 4e-152 | 43 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 6e-154 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPPH_A0064 | YP_272180.1 | outer-membrane fimbrial usher protein | VFG0944 | Protein | 3e-152 | 44 |
| PSPPH_A0064 | YP_272180.1 | outer-membrane fimbrial usher protein | VFG0853 | Protein | 5e-153 | 43 |
| PSPPH_A0064 | YP_272180.1 | outer-membrane fimbrial usher protein | VFG0857 | Protein | 5e-143 | 41 |
| PSPPH_A0064 | YP_272180.1 | outer-membrane fimbrial usher protein | VFG0849 | Protein | 5e-135 | 41 |
